RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ARHGEF35A5YM69 484 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 F5H6K3 240 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 SORBS3O60504 671 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 TPBGLP0DKB5 382 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 FGFR1P11362 822 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 ZC3H18Q86VM9 953 aaKnown RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 AMNQ9BXJ7 453 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 CPSF2Q9P2I0 782 aaKnown RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 NARFQ9UHQ1 456 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 VAV3Q9UKW4 847 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 CORO1CQ9ULV4 474 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 FAM47DPA6NHR8 397 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ZBED4O75132 1171 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 UBTFL6P0CB48 400 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ARP10275 920 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 SOX10P56693 466 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 RCN2Q14257 317 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 HHATQ5VTY9 493 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 MFSD5Q6N075 450 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 FOXR2Q6PJQ5 311 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 PHC3Q8NDX5 983 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 LMO3Q8TAP4 145 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 LRRC8CQ8TDW0 803 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 MAGEB18Q96M61 343 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 RAB3IPQ96QF0 476 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ROPN1BQ9BZX4 212 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 WNT8AQ9H1J5 351 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 TRABDQ9H4I3 376 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ROPN1Q9HAT0 212 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 LRRC4BQ9NT99 713 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 EP400Q96L91 3159 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 SLC16A4O15374 487 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 KRT36O76013 467 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 GAS8O95995 478 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ZCCHC18P0CG32 403 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 T-ENOLP0DO92 83 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 PLS3P13797 630 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 MXI1P50539 228 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 FMO1Q01740 532 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 GABPAQ06546 454 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 CETN1Q12798 172 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 RASA3Q14644 834 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 KIF22Q14807 665 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 EFTUD2Q15029 972 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 SEPT7Q16181 437 aaKnown RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 SLC30A9Q6PML9 568 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ANKS1BQ7Z6G8 1248 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 CNKSR1Q969H4 720 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 PAPOLBQ9NRJ5 636 aaKnown RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 SAE1Q9UBE0 346 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 C2CD2Q9Y426 696 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 IRS2Q9Y4H2 1338 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 GTPBP10A4D1E9 387 aaKnown RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 MAGEA4P43358 317 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 POLGP54098 1239 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 GAD2Q05329 585 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ZBTB16Q05516 673 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 RCN1Q15293 331 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 TNFAIP8L3Q5GJ75 292 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 LMNTD2Q8IXW0 634 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 DNAJC9Q8WXX5 260 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 POMGNT1Q8WZA1 660 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 FBXO6Q9NRD1 293 aaPredicted RBP10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ARMCX1Q9P291 453 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF148Q9UQR1 794 aa10.18□□□□□ -0.78
SMC1B-202ENST00000404354 DDTLA6NHG4 134 aaPredicted RBP10.17□□□□□ -0.78
SMC1B-202ENST00000404354 MAPK13O15264 365 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CDH16O75309 829 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CFHP08603 1231 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 ALAS1P13196 640 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 IVDP26440 423 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 ATP5DP30049 168 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 MTMR2Q13614 643 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CERKLQ49MI3 558 aaPredicted RBP10.17□□□□□ -0.78
SMC1B-202ENST00000404354 PCNX4Q63HM2 1172 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CYFIP1Q7L576 1253 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 ZBED8Q8IZ13 594 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 SLC7A6OSQ96CW6 309 aaPredicted RBP10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CYTH2Q99418 400 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 LXNQ9BS40 222 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 ZFP69BQ9UJL9 534 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 FRMPD4Q14CM0 1322 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CYP11B1P15538 503 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 HSPA6P17066 643 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 DYNLT1P63172 113 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 ICA1Q05084 483 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 LRRC36Q1X8D7 754 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 PLEKHG4Q58EX7 1191 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 C11orf63Q6NUN7 778 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CDC42EP5Q6NZY7 148 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 LVRNQ6Q4G3 990 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 OTOP1Q7RTM1 612 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CCNJLQ8IV13 435 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 RFWD2Q8NHY2 731 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 TAS1R2Q8TE23 839 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 FIZ1Q96SL8 496 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms