RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 IL2RBP14784 551 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 HOXA5P20719 270 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 HTR1BP28222 390 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 FLT3LGP49771 235 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 NOGQ13253 232 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 SP140Q13342 867 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 FAM47AQ5JRC9 791 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 SPOCD1Q6ZMY3 1216 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 GADL1Q6ZQY3 521 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 CASKIN2Q8WXE0 1202 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 RELTQ969Z4 430 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 SSBP3Q9BWW4 388 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 LSM14BQ9BX40 385 aaKnown RBP6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 PRDM11Q9NQV5 511 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 SLC23A1Q9UHI7 598 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 RIMBP3CA6NJZ7 1639 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 RIMBP3BA6NNM3 1639 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 RIMBP3Q9UFD9 1639 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 ABCC2Q92887 1545 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 CXorf49A8MYA2 514 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 TUSC2O75896 110 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 RPLP2P05387 115 aaKnown RBP6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 MALP21145 153 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 HK3P52790 923 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 SNAPC2Q13487 334 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 RAB39AQ14964 217 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 CIR1Q86X95 450 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 SH2D3CQ8N5H7 860 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 C3orf20Q8ND61 904 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 TEPSINQ96N21 525 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 MRI1Q9BV20 369 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 B3GNT5Q9BYG0 378 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 ARMT1Q9H993 441 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 STXBP5LQ9Y2K9 1186 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 UACAQ9BZF9 1416 aa6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 EPRSP07814 1512 aaKnown RBP6.3□□□□□ -1.4
HMGB3P19-201ENST00000403971 NUP153P49790 1475 aaKnown RBP6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 PLB1Q6P1J6 1458 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 RAD17O75943 681 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 SBK3P0C264 359 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 USP14P54578 494 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 CTXN1P60606 82 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 ELAVL1Q15717 326 aaKnown RBP6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 CSRP2Q16527 193 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 NPNTQ6UXI9 565 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 HEATR3Q7Z4Q2 680 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 PLXDC1Q8IUK5 500 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 D2HGDHQ8N465 521 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 MB21D1Q8N884 522 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 NT5C1BQ96P26 610 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 MSL2Q9HCI7 577 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 LMBRD1Q9NUN5 540 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 MOCS1Q9NZB8 636 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 CALCOCO1Q9P1Z2 691 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 ABCF2Q9UG63 623 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 STAP2Q9UGK3 403 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 SLC30A1Q9Y6M5 507 aa6.29□□□□□ -1.4
HMGB3P19-201ENST00000403971 PNPLA7Q6ZV29 1317 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 TCRBV7S2A1N4TA0A589 114 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 SLC16A6O15403 523 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 ATP5JP18859 108 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 RAP2BP61225 183 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 CYB5RLQ6IPT4 315 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 KSR2Q6VAB6 950 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 RNF169Q8NCN4 708 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 BORCS6Q96GS4 357 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 C20orf173Q96LM9 149 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 RBM15Q96T37 977 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 CPPED1Q9BRF8 314 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 CPEB1Q9BZB8 566 aaKnown RBP6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 POLHQ9Y253 713 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 KDM5BQ9UGL1 1544 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 ADCY10Q96PN6 1610 aa6.28□□□□□ -1.4
HMGB3P19-201ENST00000403971 TBKBP1A7MCY6 615 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 NT5C1B-RDH14C9J2C7 533 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 H3BUI4 141 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 F2RL2O00254 374 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 TPP1O14773 563 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 GRM6O15303 877 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 CD1AP06126 327 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 NKX6-1P78426 367 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 PTH1RQ03431 593 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 PLS1Q14651 629 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 ICAM4Q14773 271 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 FLYWCH1Q4VC44 716 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 SPTY2D1Q68D10 685 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 SWSAP1Q6NVH7 229 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZNF529Q6P280 563 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms