RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 YDJCA8MPS7 323 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 DHX15O43143 795 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 MGRN1O60291 552 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 KRT16P08779 473 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 TCF4P15884 667 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 NPTX2P47972 431 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 NFIL3Q16649 462 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 TKFCQ3LXA3 575 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 PSPC1Q8WXF1 523 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 NSRP1Q9H0G5 558 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■□□ 18.8
RBM39-206ENST00000403542 TMOD2Q9NZR1 351 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 CNOT7Q9UIV1 285 aaKnown RBP12.78□□□□□ -0.36
RBM39-206ENST00000403542 GTF3C4Q9UKN8 822 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 SLC12A4Q9UP95 1085 aa12.78□□□□□ -0.36
RBM39-206ENST00000403542 SCN9AQ15858 1988 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 BANF1O75531 89 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 DNAJC8O75937 253 aaPredicted RBP12.77□□□□□ -0.36
RBM39-206ENST00000403542 UPP2O95045 317 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 HSPA6P17066 643 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 ACOT2P49753 483 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 NCALDP61601 193 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 FBXL13Q8NEE6 735 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 NINJ2Q9NZG7 142 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.36
RBM39-206ENST00000403542 ASTN2O75129 1339 aaPredicted RBP12.77□□□□□ -0.37
RBM39-206ENST00000403542 SIPA1L1O43166 1804 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 C21orf2O43822 256 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 TTC4O95801 387 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 CYP1A2P05177 515 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
RBM39-206ENST00000403542 WNT7BP56706 349 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 FASTKD3Q14CZ7 662 aaKnown RBP12.77□□□□□ -0.37
RBM39-206ENST00000403542 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 C4orf33Q8N1A6 199 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 NSMCE1Q8WV22 266 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 RANBP17Q9H2T7 1088 aaKnown RBP12.77□□□□□ -0.37
RBM39-206ENST00000403542 EHMT1Q9H9B1 1298 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 SLCO1B3Q9NPD5 702 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 TBX20Q9UMR3 447 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 NAALADL1Q9UQQ1 740 aa12.77□□□□□ -0.37
RBM39-206ENST00000403542 AFF2P51816 1311 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 CCNE2O96020 404 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 TNNI1P19237 187 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 TAS2R40P59535 323 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 ACAD10Q6JQN1 1059 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 SPATA21Q7Z572 469 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 DDX1Q92499 740 aaKnown RBP12.76□□□□□ -0.37
RBM39-206ENST00000403542 SNF8Q96H20 258 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 TMEM237Q96Q45 408 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 STMN4Q9H169 189 aaPredicted RBP12.76□□□□□ -0.37
RBM39-206ENST00000403542 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 UBE4BO95155 1302 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 RASA4BC9J798 803 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 RASA4O43374 803 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 SUN1O94901 812 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 ANP32DO95626 131 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 GZMAP12544 262 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 ITIH4Q14624 930 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 B3GNT9Q6UX72 402 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 FHDC1Q9C0D6 1143 aaPredicted RBP12.76□□□□□ -0.37
RBM39-206ENST00000403542 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
RBM39-206ENST00000403542 ADGRA3Q8IWK6 1321 aa12.76□□□□□ -0.37
RBM39-206ENST00000403542 WDR91A4D1P6 747 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 DIAPH2O60879 1101 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 IFNB1P01574 187 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 RFX1P22670 979 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 IVDP26440 423 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 MGAT5Q09328 741 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 IZUMO3Q5VZ72 239 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 SLC39A4Q6P5W5 647 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 TMEM161BQ8NDZ6 487 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 CEP170P1Q96L14 293 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 RIT2Q99578 217 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 C12orf65Q9H3J6 166 aaKnown RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 LRRC19Q9H756 370 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 KCND2Q9NZV8 630 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 GAS8O95995 478 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 GHRP10912 638 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 NQO1P15559 274 aaKnown RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 FOXN2P32314 431 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 NSFP46459 744 aaKnown RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 HADHBP55084 474 aaKnown RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 GTF2BQ00403 316 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 DMP1Q13316 513 aaPredicted RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 CYP1B1Q16678 543 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 CLEC16AQ2KHT3 1053 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 P3H1Q32P28 736 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 ANO5Q75V66 913 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms