RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 IFT74Q96LB3 600 aa13.58□□□□□ -0.24
PRAME-204ENST00000403441 UROC1Q96N76 676 aa13.58□□□□□ -0.24
PRAME-204ENST00000403441 RPP25Q9BUL9 199 aaKnown RBP13.58□□□□□ -0.24
PRAME-204ENST00000403441 CCDC113Q9H0I3 377 aa13.58□□□□□ -0.24
PRAME-204ENST00000403441 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
PRAME-204ENST00000403441 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.24
PRAME-204ENST00000403441 DMXL1Q9Y485 3027 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 KANSL1LA0AUZ9 987 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 TMEM189-UBE2V1I3L0A0 370 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 ADAM12O43184 909 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 OR52Z1P0C646 297 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 FGFR3P22607 806 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 RPA1P27694 616 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 UBXN2BQ14CS0 331 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 RTL10Q7L3V2 364 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 RUBCNQ92622 972 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 SPATA6Q9NWH7 488 aaPredicted RBP13.57□□□□□ -0.24
PRAME-204ENST00000403441 MTRRQ9UBK8 725 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
PRAME-204ENST00000403441 OTOGLQ3ZCN5 2332 aa13.57□□□□□ -0.24
PRAME-204ENST00000403441 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 FRYLO94915 3013 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 LAMTOR5O43504 91 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 KINO60870 393 aaKnown RBP13.56□□□□□ -0.24
PRAME-204ENST00000403441 GLULP15104 373 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 MAGEA9P43362 315 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
PRAME-204ENST00000403441 ZNF528Q3MIS6 628 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 RSPO2Q6UXX9 243 aaPredicted RBP13.56□□□□□ -0.24
PRAME-204ENST00000403441 NPAS3Q8IXF0 933 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 SNX21Q969T3 373 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
PRAME-204ENST00000403441 KIFC3Q9BVG8 833 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 OSBPL6Q9BZF3 934 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
PRAME-204ENST00000403441 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 USP20Q9Y2K6 914 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 MRPS23Q9Y3D9 190 aaKnown RBP13.56□□□□□ -0.24
PRAME-204ENST00000403441 BACE2Q9Y5Z0 518 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
PRAME-204ENST00000403441 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 LRRN2O75325 713 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 MUTP22033 750 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 CLCNKBP51801 687 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 TTC38Q5R3I4 469 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 DGLUCYQ7Z3D6 616 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 RMDN1Q96DB5 314 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 BORCS6Q96GS4 357 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 PPP1R10Q96QC0 940 aaKnown RBP13.55□□□□□ -0.24
PRAME-204ENST00000403441 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
PRAME-204ENST00000403441 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
PRAME-204ENST00000403441 CXCL16Q9H2A7 254 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 GDE1Q9NZC3 331 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 DNMT3BQ9UBC3 853 aaKnown RBP13.55□□□□□ -0.24
PRAME-204ENST00000403441 FBXO4Q9UKT5 387 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 DOCK6Q96HP0 2047 aa13.55□□□□□ -0.24
PRAME-204ENST00000403441 CACNA1IQ9P0X4 2223 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 K7ERI5 159 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 PRRG1O14668 218 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 SPTLC1O15269 473 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 ECI2O75521 394 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 LRG1P02750 347 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 EDN1P05305 212 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 RHOP08100 348 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 TKTP29401 623 aaKnown RBP13.54□□□□□ -0.24
PRAME-204ENST00000403441 ELF1P32519 619 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 CCT6AP40227 531 aaKnown RBP13.54□□□□□ -0.24
PRAME-204ENST00000403441 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
PRAME-204ENST00000403441 ZNF174Q15697 407 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 UPP1Q16831 310 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
PRAME-204ENST00000403441 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.54□□□□□ -0.24
PRAME-204ENST00000403441 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 MRPS17Q9Y2R5 130 aaKnown RBP13.54□□□□□ -0.24
PRAME-204ENST00000403441 PCDHGA2Q9Y5H1 932 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 CEP250Q9BV73 2442 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 FANCMQ8IYD8 2048 aa13.54□□□□□ -0.24
PRAME-204ENST00000403441 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
PRAME-204ENST00000403441 I3L4J1 428 aa13.53□□□□□ -0.24
PRAME-204ENST00000403441 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
PRAME-204ENST00000403441 NCAM2O15394 837 aa13.53□□□□□ -0.24
PRAME-204ENST00000403441 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.246e-8■□□□□ 9.9
PRAME-204ENST00000403441 CSTF1Q05048 431 aaKnown RBP13.53□□□□□ -0.24
PRAME-204ENST00000403441 NBR1Q14596 966 aa13.53□□□□□ -0.24
PRAME-204ENST00000403441 PUM1Q14671 1186 aaKnown RBP eCLIP13.53□□□□□ -0.246e-12■□□□□ 10.1
PRAME-204ENST00000403441 ZNF568Q3ZCX4 644 aa13.53□□□□□ -0.24
PRAME-204ENST00000403441 RILPL1Q5EBL4 403 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms