RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 SHC3Q92529 594 aa14.34□□□□□ -0.11
CEACAM1-206ENST00000403136 DDX3XO00571 662 aaKnown RBP eCLIP14.33□□□□□ -0.122e-26■■□□□ 13.5
CEACAM1-206ENST00000403136 IL18RAPO95256 599 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 EIF4BP23588 611 aaKnown RBP14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 HOXA11P31270 313 aaPredicted RBP14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 NAB2Q15742 525 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 ALKBH5Q6P6C2 394 aaKnown RBP14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 CATSPER4Q7RTX7 472 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 TRAPPC11Q7Z392 1133 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 SLC35F6Q8N357 371 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 SLC30A5Q8TAD4 765 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 PXYLP1Q8TE99 480 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 ELMO3Q96BJ8 720 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 OSMRQ99650 979 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 ADPGKQ9BRR6 497 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 NAGPAQ9UK23 515 aa14.33□□□□□ -0.12
CEACAM1-206ENST00000403136 TNFAIP3P21580 790 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 USP8P40818 1118 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 NCOA4Q13772 614 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 KCNA10Q16322 511 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 TAF2Q6P1X5 1199 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 ERO1AQ96HE7 468 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 L2HGDHQ9H9P8 463 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 C1orf112Q9NSG2 853 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 GTF2IRD1Q9UHL9 959 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 NENFQ9UMX5 172 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 LACTBL1A8MY62 500 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 FKTNO75072 461 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 URI1O94763 535 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 ASGR1P07306 291 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 CXCL8P10145 99 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 CST5P28325 142 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 CRYBB1P53674 252 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 TFAMQ00059 246 aaKnown RBP14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 ARHGEF6Q15052 776 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 AGPAT1Q99943 283 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 MTMR12Q9C0I1 747 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 ASB7Q9H672 318 aa14.32□□□□□ -0.12
CEACAM1-206ENST00000403136 MACROD2A1Z1Q3 448 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 CYP26A1O43174 497 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 SGPL1O95470 568 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 TMEM191BP0C7N4 346 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 SNX17Q15036 470 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 SLC10A6Q3KNW5 377 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 DCAF4L1Q3SXM0 396 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 SCARA3Q6AZY7 606 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 SPOPLQ6IQ16 392 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 APBB1IPQ7Z5R6 666 aaPredicted RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 GLYCTKQ8IVS8 523 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 EFCAB13Q8IY85 973 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 LNX1Q8TBB1 728 aaPredicted RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 U2AF1L4Q8WU68 220 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 SECISBP2LQ93073 1101 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 ACAP3Q96P50 834 aa14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 APOBEC3GQ9HC16 384 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 DDX20Q9UHI6 824 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-206ENST00000403136 CTAGE9A4FU28 777 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 MEFVO15553 781 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 TNNC2P02585 160 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 AXLP30530 894 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 TRPC3Q13507 836 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 SGSM1Q2NKQ1 1148 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 NOTUMQ6P988 496 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 SLC27A1Q6PCB7 646 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 ZNF296Q8WUU4 475 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 TMEM40Q8WWA1 233 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 DHX38Q92620 1227 aaKnown RBP14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 CELF4Q9BZC1 486 aaKnown RBP14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 NUB1Q9Y5A7 615 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 CASP8AP2Q9UKL3 1982 aa14.3□□□□□ -0.12
CEACAM1-206ENST00000403136 ASS1P00966 412 aaKnown RBP14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 GRM5P41594 1212 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 MYL6P60660 151 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 CUL2Q13617 745 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 FAM47CQ5HY64 1035 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 NAPGQ99747 312 aaPredicted RBP14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 IMPG2Q9BZV3 1241 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 SAGE1Q9NXZ1 904 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 SALL4Q9UJQ4 1053 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 INTUQ9ULD6 942 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 BTNL10A8MVZ5 291 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 TACC1O75410 805 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 NPTXRO95502 500 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 H2AFZP0C0S5 128 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 CYP11B1P15538 503 aa14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 ACO1P21399 889 aaKnown RBP14.29□□□□□ -0.12
CEACAM1-206ENST00000403136 TBXAS1P24557 533 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms