RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 NCAM2O15394 837 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 MED24O75448 989 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
VAMP1-203ENST00000400911 CLCNKBP51801 687 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 ATXN1P54253 815 aaKnown RBP16.05■□□□□ 0.16
VAMP1-203ENST00000400911 FZD5Q13467 585 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 GLRA4Q5JXX5 417 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 TANGO2Q6ICL3 276 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 RTL10Q7L3V2 364 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 NECAB1Q8N987 351 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 SECISBP2LQ93073 1101 aaKnown RBP16.05■□□□□ 0.16
VAMP1-203ENST00000400911 CNTNAP3BQ96NU0 1288 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 CCDC113Q9H0I3 377 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 HEBP1Q9NRV9 189 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 SMG5Q9UPR3 1016 aaKnown RBP16.05■□□□□ 0.16
VAMP1-203ENST00000400911 BACE2Q9Y5Z0 518 aa16.05■□□□□ 0.16
VAMP1-203ENST00000400911 SHISA7A6NL88 538 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 TMEM189-UBE2V1I3L0A0 370 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 LILRB5O75023 590 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 CEBPBP17676 345 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 RPS9P46781 194 aaKnown RBP16.04■□□□□ 0.16
VAMP1-203ENST00000400911 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
VAMP1-203ENST00000400911 MTAPQ13126 283 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 UPP1Q16831 310 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 PADI6Q6TGC4 694 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 GPR161Q8N6U8 529 aaKnown RBP16.04■□□□□ 0.16
VAMP1-203ENST00000400911 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 NELL1Q92832 810 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
VAMP1-203ENST00000400911 KIFC3Q9BVG8 833 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 EPC1Q9H2F5 836 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 GOLGA2P5Q9HBQ8 144 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 POLD4Q9HCU8 107 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 TUFT1Q9NNX1 390 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
VAMP1-203ENST00000400911 OTOGLQ3ZCN5 2332 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 TRAPPC3O43617 180 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 CYP11B2P19099 503 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 SDHBP21912 280 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 BRCC3P46736 316 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 FOSBP53539 338 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 ADCY1Q08828 1119 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 ANKS3Q6ZW76 656 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 DIS3L2Q8IYB7 885 aaKnown RBP16.03■□□□□ 0.16
VAMP1-203ENST00000400911 C3orf58Q8NDZ4 430 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 ELSPBP1Q96BH3 223 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
VAMP1-203ENST00000400911 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-203ENST00000400911 MRPS17Q9Y2R5 130 aaKnown RBP16.03■□□□□ 0.16
VAMP1-203ENST00000400911 DOCK8Q8NF50 2099 aa16.03■□□□□ 0.16
VAMP1-203ENST00000400911 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 NRG2O14511 850 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-203ENST00000400911 PRRG1O14668 218 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 LRG1P02750 347 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 PTPN2P17706 415 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 TGM1P22735 817 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 MCM7P33993 719 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 NAMPTP43490 491 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 GRM2Q14416 872 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 ZNF461Q8TAF7 563 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 TCEAL4Q96EI5 215 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 UROC1Q96N76 676 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 POLR3CQ9BUI4 534 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-203ENST00000400911 PRMT8Q9NR22 394 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-203ENST00000400911 USP18Q9UMW8 372 aa16.02■□□□□ 0.16
VAMP1-203ENST00000400911 NDRG2Q9UN36 371 aaKnown RBP16.02■□□□□ 0.16
VAMP1-203ENST00000400911 SMIM28A0A1B0GU29 152 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ARHGEF37A1IGU5 675 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 DCDC2BA2VCK2 349 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 PRR5-ARHGAP8B1AHC4 643 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 KRT37O76014 449 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ABLIM3O94929 683 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 FCARP24071 287 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ELF1P32519 619 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ARPP19P56211 112 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ARHGAP8P85298 464 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ROR1Q01973 937 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 LMNB2Q03252 620 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 FAM78AQ5JUQ0 283 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ATF7IP2Q5U623 682 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 SLC8B1Q6J4K2 584 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 ZNF687Q8N1G0 1237 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 BRD9Q9H8M2 597 aa16.01■□□□□ 0.15
VAMP1-203ENST00000400911 CDV3Q9UKY7 258 aaKnown RBP16.01■□□□□ 0.15
VAMP1-203ENST00000400911 RPA1P27694 616 aa16■□□□□ 0.15
VAMP1-203ENST00000400911 EFNA5P52803 228 aa16■□□□□ 0.15
VAMP1-203ENST00000400911 SOX4Q06945 474 aaPredicted RBP16■□□□□ 0.15
VAMP1-203ENST00000400911 PPP2R5AQ15172 486 aa16■□□□□ 0.15
VAMP1-203ENST00000400911 ANKRD1Q15327 319 aa16■□□□□ 0.15
VAMP1-203ENST00000400911 ME3Q16798 604 aa16■□□□□ 0.15
VAMP1-203ENST00000400911 PRSS36Q5K4E3 855 aa16■□□□□ 0.15
VAMP1-203ENST00000400911 DNASE1L2Q92874 299 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms