RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 DBR1Q9UK59 544 aaKnown RBP14.5□□□□□ -0.09
VAPA-202ENST00000400000 NDUFB5O43674 189 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 BRAFP15056 766 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 KRT72Q14CN4 511 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 CD274Q9NZQ7 290 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 CEP170Q5SW79 1584 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 MZF1P28698 734 aaPredicted RBP14.5□□□□□ -0.09
VAPA-202ENST00000400000 GMPSP49915 693 aaPredicted RBP14.5□□□□□ -0.09
VAPA-202ENST00000400000 C6orf10Q5SRN2 563 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 LAYNQ6UX15 382 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 ANKS3Q6ZW76 656 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 DEFB128Q7Z7B8 93 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 TMEM117Q9H0C3 514 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 ATP1A1P05023 1023 aaKnown RBP14.5□□□□□ -0.09
VAPA-202ENST00000400000 KLK7P49862 253 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.5□□□□□ -0.091e-7■■□□□ 12.4
VAPA-202ENST00000400000 PODXLO00592 558 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 SLC16A1P53985 500 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 RAD51Q06609 339 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 CACUL1Q86Y37 369 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 DHX40Q8IX18 779 aaKnown RBP14.5□□□□□ -0.09
VAPA-202ENST00000400000 SRBD1Q8N5C6 995 aaKnown RBP14.5□□□□□ -0.09
VAPA-202ENST00000400000 IPMKQ8NFU5 416 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 YIPF3Q9GZM5 350 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 TRIM10Q9UDY6 481 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 KDM5CP41229 1560 aa14.5□□□□□ -0.09
VAPA-202ENST00000400000 H7C1W4 665 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ADCY3O60266 1144 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 SKIP12755 728 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ZRANB3Q5FWF4 1079 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 AP1ARQ63HQ0 302 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 GRAMD4Q6IC98 578 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ST13P4Q8IZP2 240 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 PNKPQ96T60 521 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ENTPD7Q9NQZ7 604 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 PARVAQ9NVD7 372 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 MAGI2Q86UL8 1455 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 NCF1BA6NI72 391 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 NCF1CA8MVU1 366 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 NCF1P14598 390 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 GRM4Q14833 912 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 KRT39Q6A163 491 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 SELENONQ9NZV5 590 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 TRIM33Q9UPN9 1127 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 LGALS16A8MUM7 142 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 DCTN3O75935 186 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 GNASQ5JWF2 1037 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 KLF6Q99612 283 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 NPTXRO95502 500 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 SCP2P22307 547 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 TBXAS1P24557 533 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 CUL1Q13616 776 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 LONRF1Q17RB8 773 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 LVRNQ6Q4G3 990 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 TCOF1Q13428 1488 aaKnown RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 A0A087WUV0 522 aaPredicted RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 LIFRP42702 1097 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 SNAPC2Q13487 334 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 TMEM132DQ14C87 1099 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 DCAF6Q58WW2 860 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ARL6IP4Q66PJ3 421 aaKnown RBP14.49□□□□□ -0.09
VAPA-202ENST00000400000 PPP1R2P3Q6NXS1 205 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ATPAF2Q8N5M1 289 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 MRFAP1Q9Y605 127 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ATP7BP35670 1465 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 CCDC159P0C7I6 412 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 CAPZA2P47755 286 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 ANGPT1Q15389 498 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 DEFB132Q7Z7B7 95 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 TRIM51Q9BSJ1 452 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 SPATA31A3Q5VYP0 1347 aa14.49□□□□□ -0.09
VAPA-202ENST00000400000 C5orf58C9J3I9 102 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 THPOP40225 353 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 ARHGEF7Q14155 803 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 ALS2CLQ60I27 953 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 NPHS2Q9NP85 383 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 DPEP1P16444 411 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 ARFIP2P53365 341 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 DGKHQ86XP1 1220 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 SNF8Q96H20 258 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
VAPA-202ENST00000400000 PCMTD2Q9NV79 361 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 PCDHA10Q9Y5I2 948 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 ENO3P13929 434 aaPredicted RBP14.48□□□□□ -0.09
VAPA-202ENST00000400000 P3H1Q32P28 736 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 C10orf120Q5SQS8 335 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 EFCAB12Q6NXP0 572 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 HAUS5O94927 633 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 GJB7Q6PEY0 223 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.48□□□□□ -0.096e-6■□□□□ 10
VAPA-202ENST00000400000 SLC44A2Q8IWA5 706 aaPredicted RBP14.48□□□□□ -0.09
VAPA-202ENST00000400000 CENPKQ9BS16 269 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 ASB14A6NK59 587 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 KLHL38Q2WGJ6 581 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 FUT11Q495W5 492 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms