RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 PODXLO00592 558 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 TEX28O15482 410 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 B3GAT3O94766 335 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 BRD1O95696 1058 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 GLUD1P00367 558 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 CLTAP09496 248 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 SPATA31D3P0C874 917 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 HOXB8P17481 243 aaPredicted RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 SCP2P22307 547 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 ABCD1P33897 745 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 CLCN4P51793 760 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 ASIC1P78348 528 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 DSG1Q02413 1049 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 SOX4Q06945 474 aaPredicted RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 KCNC3Q14003 757 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 CBX2Q14781 532 aaPredicted RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 PSMD5Q16401 504 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 HERC4Q5GLZ8 1057 aaPredicted RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 ZBTB41Q5SVQ8 909 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 ELMSAN1Q6PJG2 1045 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 TMC5Q6UXY8 1006 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 SPATA31D4Q6ZUB0 917 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 PALB2Q86YC2 1186 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 CCDC65Q8IXS2 484 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 RNF168Q8IYW5 571 aaPredicted RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 SLC22A17Q8WUG5 538 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.945e-8■■■□□ 15.1
USP16-202ENST00000399973 C18orf25Q96B23 403 aaPredicted RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 FAM212AQ96EL1 285 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 FBXL18Q96ME1 805 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 UROC1Q96N76 676 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 ZMAT2Q96NC0 199 aaKnown RBP9.18□□□□□ -0.94
USP16-202ENST00000399973 HAPLN2Q9GZV7 340 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 IKZF4Q9H2S9 585 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 SFXN1Q9H9B4 322 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 SLC38A7Q9NVC3 462 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 PANK4Q9NVE7 773 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 CNTN3Q9P232 1028 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 SEL1LQ9UBV2 794 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 NUB1Q9Y5A7 615 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 C5orf42Q9H799 3197 aa9.18□□□□□ -0.94
USP16-202ENST00000399973 ANKRD63C9JTQ0 380 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 OGTO15294 1046 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 MEFVO15553 781 aaPredicted RBP9.17□□□□□ -0.94
USP16-202ENST00000399973 PIGRP01833 764 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 KCNE1P15382 129 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 MCM4P33991 863 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 BRCC3P46736 316 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 KRT85P78386 507 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 GTF2BQ00403 316 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 CREMQ03060 361 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 ELAVL2Q12926 359 aaKnown RBP9.17□□□□□ -0.94
USP16-202ENST00000399973 E2F4Q16254 413 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 KIAA0319Q5VV43 1072 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 ADALQ6DHV7 355 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 SLC39A4Q6P5W5 647 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 TMEM184AQ6ZMB5 413 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.17□□□□□ -0.94
USP16-202ENST00000399973 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 IQUBQ8NA54 791 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 C3orf58Q8NDZ4 430 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 POMGNT1Q8WZA1 660 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 HVCN1Q96D96 273 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 DNAJC19Q96DA6 116 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 RIPOR3Q96MK2 946 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 FIZ1Q96SL8 496 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 TTPALQ9BTX7 342 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 PHF7Q9BWX1 381 aaPredicted RBP9.17□□□□□ -0.94
USP16-202ENST00000399973 FGFBP2Q9BYJ0 223 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 S1PR5Q9H228 398 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 TNMDQ9H2S6 317 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 CUEDC2Q9H467 287 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 POMKQ9H5K3 350 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 RPF1Q9H9Y2 349 aaKnown RBP9.17□□□□□ -0.94
USP16-202ENST00000399973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP16-202ENST00000399973 PCDHA7Q9UN72 937 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 EXOC7Q9UPT5 735 aa9.17□□□□□ -0.94
USP16-202ENST00000399973 FAM86C2PA6NEL3 165 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 TMEM189-UBE2V1I3L0A0 370 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 POLR2DO15514 142 aaKnown RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 TRAPPC3O43617 180 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 LILRB3O75022 631 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 EFEMP2O95967 443 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 IGFBP6P24592 240 aaPredicted RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 TKTP29401 623 aaKnown RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 MTHFRP42898 656 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 ACOT2P49753 483 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 GUCY2FP51841 1108 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 CASP5P51878 434 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 ITIH3Q06033 890 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 ENOX2Q16206 610 aaKnown RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 KYAT1Q16773 422 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 UPP1Q16831 310 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 SLC10A6Q3KNW5 377 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 XKR4Q5GH76 650 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 AXDND1Q5T1B0 1012 aaPredicted RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 L1TD1Q5T7N2 865 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms