RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CYP2W1Q8TAV3 490 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 HAS1Q92839 578 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 LRMDAQ9H2I8 198 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 A0A0A6YYK5 440 aaPredicted RBP18.18■□□□□ 0.5
PTPRA-205ENST00000399903 A0A0G2JND7 137 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 PIAS1O75925 651 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 PRKCIP41743 596 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 SEPT7Q16181 437 aaKnown RBP18.18■□□□□ 0.5
PTPRA-205ENST00000399903 RNF43Q68DV7 783 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 MTHFD1LQ6UB35 978 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 ACER1Q8TDN7 264 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 ACP6Q9NPH0 428 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.18■□□□□ 0.5
PTPRA-205ENST00000399903 BAG2O95816 211 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 VHLP40337 213 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 ITGA8P53708 1063 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 KPNB1Q14974 876 aaKnown RBP18.17■□□□□ 0.5
PTPRA-205ENST00000399903 TMEM119Q4V9L6 283 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 PRR16Q569H4 304 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 ZFYVE27Q5T4F4 411 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 RBM41Q96IZ5 413 aaKnown RBP18.17■□□□□ 0.5
PTPRA-205ENST00000399903 SERPINB12Q96P63 405 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 LMCD1Q9NZU5 365 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 SLX4Q8IY92 1834 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 CALUO43852 315 aaPredicted RBP18.17■□□□□ 0.5
PTPRA-205ENST00000399903 NDUFB10O96000 172 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 CA4P22748 312 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 MARK3P27448 753 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 GSTT1P30711 240 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 PPATQ06203 517 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 HS2ST1Q7LGA3 356 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 TRIM74Q86UV6 250 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 TRIM73Q86UV7 250 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 SLC35C1Q96A29 364 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 HEMGNQ9BXL5 484 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 ROPN1BQ9BZX4 212 aaPredicted RBP18.17■□□□□ 0.5
PTPRA-205ENST00000399903 OCEL1Q9H607 264 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 ROPN1Q9HAT0 212 aaPredicted RBP18.17■□□□□ 0.5
PTPRA-205ENST00000399903 SIX2Q9NPC8 291 aa18.17■□□□□ 0.5
PTPRA-205ENST00000399903 CPA2P48052 419 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 NOVP48745 357 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 HHATQ5VTY9 493 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 FRMD5Q7Z6J6 570 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 DCLRE1BQ9H816 532 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 ACADSP16219 412 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 CCNG1P51959 295 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 ZC3H12AQ5D1E8 599 aaKnown RBP18.16■□□□□ 0.5
PTPRA-205ENST00000399903 FOXB2Q5VYV0 432 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 TRMT1LQ7Z2T5 733 aaKnown RBP18.16■□□□□ 0.5
PTPRA-205ENST00000399903 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 FAM81AQ8TBF8 368 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 ANAPC5Q9UJX4 755 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 WFS1O76024 890 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 WDR4P57081 412 aaKnown RBP18.16■□□□□ 0.5
PTPRA-205ENST00000399903 PDIA5Q14554 519 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 MFSD5Q6N075 450 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 TRMT10CQ7L0Y3 403 aaKnown RBP18.16■□□□□ 0.5
PTPRA-205ENST00000399903 ART4Q93070 314 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 ZSWIM1Q9BR11 485 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 REEP2Q9BRK0 252 aa18.16■□□□□ 0.5
PTPRA-205ENST00000399903 TBCAO75347 108 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 MED24O75448 989 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 CHRNB2P17787 502 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 YY1P25490 414 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 DRG2P55039 364 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 NPEPPSP55786 919 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 MTM1Q13496 603 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 LBRQ14739 615 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 ZRSR2Q15696 482 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 SLC15A2Q16348 729 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 CFAP157Q5JU67 520 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 ISLR2Q6UXK2 745 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 PPP1R21Q6ZMI0 780 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 PDCD7Q8N8D1 485 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 SLC7A6OSQ96CW6 309 aaPredicted RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 CCDC77Q9BR77 488 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 PICK1Q9NRD5 415 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 TTC7AQ9ULT0 858 aaPredicted RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 FOXN3O00409 490 aaPredicted RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 RPL13P26373 211 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 LRRC36Q1X8D7 754 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 ZNF333Q96JL9 665 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 RHBDL2Q9NX52 303 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 DIS3Q9Y2L1 958 aaKnown RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 FAM47DPA6NHR8 397 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 GYG2O15488 501 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 DCTN3O75935 186 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 TTC4O95801 387 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 PARP6Q2NL67 630 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 IRGCQ6NXR0 463 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 SLC13A5Q86YT5 568 aaPredicted RBP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPRA-205ENST00000399903 LRCH1Q9Y2L9 728 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 ASB3Q9Y575 518 aa18.15■□□□□ 0.5
PTPRA-205ENST00000399903 COL11A2P13942 1736 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms