RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCDC85AQ96PX6 553 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 ETNK1Q9HBU6 452 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 PTGES3LE9PB15 166 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 H7C1D1 291 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 PDX1P52945 283 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ABATP80404 500 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 MTX1Q13505 466 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CCSAPQ6IQ19 270 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 C1orf50Q9BV19 199 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 SOS1Q07889 1333 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 GIMAP1-GIMAP5A0A087WTJ2 511 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ARPC4-TTLL3A0A0A6YYG9 625 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 HIST1H2AGP0C0S8 130 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 HIST1H2ADP20671 130 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ERICH5Q6P6B1 374 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 RPTNQ6XPR3 784 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 NEDD1Q8NHV4 660 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 HIST1H2AHQ96KK5 128 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 TSPAN18Q96SJ8 248 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 HIST1H2AJQ99878 128 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 H2AFJQ9BTM1 129 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 EXO5Q9H790 373 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ENO4A6NNW6 628 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 KCTD21Q4G0X4 260 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 LDHAL6AQ6ZMR3 332 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CLYBLQ8N0X4 340 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 MND1Q9BWT6 205 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 MSL3P1P0C860 447 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 DGUOKQ16854 277 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CCDC137Q6PK04 289 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 EXOC2Q96KP1 924 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CAMKK2Q96RR4 588 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 SIK3Q9Y2K2 1263 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 IFNGR2P38484 337 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 NCAPHQ15003 741 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 TGS1Q96RS0 853 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 BTBD7Q9P203 1132 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 GGA2Q9UJY4 613 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 PCDHB4Q9Y5E5 795 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 LRRC14BA6NHZ5 514 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ZW10O43264 779 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF284Q2VY69 593 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 MYOCDQ8IZQ8 938 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 DDX17Q92841 729 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 TESK2Q96S53 571 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 TMEM138Q9NPI0 162 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 RBMXL2O75526 392 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 NFICP08651 508 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ARFIP2P53365 341 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 PRAMEP78395 509 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 SPATA18Q8TC71 538 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 AASDHPPTQ9NRN7 309 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 KRT34O76011 436 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 FAM200BP0CF97 657 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 DHX32Q7L7V1 743 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 SKAP1Q86WV1 359 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 MAGEE2Q8TD90 523 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 GLG1Q92896 1179 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 AXIN2Q9Y2T1 843 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CCDC188H7C350 402 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 AADACL4Q5VUY2 407 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 DNAJC9Q8WXX5 260 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 NLRP3Q96P20 1036 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 FAM50BQ9Y247 325 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 OR7A10O76100 309 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 HPGDP15428 266 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CCNIQ14094 377 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 NAALADL2Q58DX5 795 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ODR4Q5SWX8 454 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CHST3Q7LGC8 479 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF112Q9UJU3 913 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 MAFFQ9ULX9 164 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 H0YJX3 145 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 PAICSP22234 425 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CES1P23141 567 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CHN2P52757 468 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 ALDH6A1Q02252 535 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 PLOD1Q02809 727 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 UGP2Q16851 508 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 KBTBD12Q3ZCT8 623 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 GPATCH4Q5T3I0 446 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 FAM160B1Q5W0V3 765 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 EPHX4Q8IUS5 362 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CAB39LQ9H9S4 337 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CDC23Q9UJX2 597 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 SNAP23O00161 211 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 PDGFRBP09619 1106 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 CCNA2P20248 432 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 LRRC31Q6UY01 552 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 NUP50Q9UKX7 468 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 TPRP12270 2363 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 SPDYAQ5MJ70 313 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 C12orf60Q5U649 245 aa8.99□□□□□ -0.97
CACNA1C-220ENST00000399655 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms