RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 DNAJB4Q9UDY4 337 aa19.2■□□□□ 0.66
CTNS-203ENST00000399306 PUF60Q9UHX1 559 aaKnown RBP19.2■□□□□ 0.66
CTNS-203ENST00000399306 UBQLN1Q9UMX0 589 aaKnown RBP19.2■□□□□ 0.66
CTNS-203ENST00000399306 LACTBL1A8MY62 500 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 NRP1O14786 923 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 PSMA7O14818 248 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 LPXNO60711 386 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 FGF18O76093 207 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 ITGB1P05556 798 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 LRPAP1P30533 357 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 LRRC63Q05C16 580 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 CAMK4Q16566 473 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 SPRED2Q7Z698 418 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 SPPL3Q8TCT6 385 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 SAAL1Q96ER3 474 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 TMEM169Q96HH4 297 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 PCIF1Q9H4Z3 704 aa19.19■□□□□ 0.66
CTNS-203ENST00000399306 RBAKQ9NYW8 714 aaPredicted RBP19.19■□□□□ 0.66
CTNS-203ENST00000399306 COL4A4P53420 1690 aaPredicted RBP19.18■□□□□ 0.66
CTNS-203ENST00000399306 EPOPA6NHQ4 379 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 B4GALT3O60512 393 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 NR3C1P04150 777 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 SNRNP35Q16560 246 aaKnown RBP19.18■□□□□ 0.66
CTNS-203ENST00000399306 CT47A1Q5JQC4 288 aaPredicted RBP19.18■□□□□ 0.66
CTNS-203ENST00000399306 SPATA1Q5VX52 437 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 DDX53Q86TM3 631 aaKnown RBP19.18■□□□□ 0.66
CTNS-203ENST00000399306 GPR65Q8IYL9 337 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 KIF12Q96FN5 646 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 GUCD1Q96NT3 240 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 CDX2Q99626 313 aaPredicted RBP19.18■□□□□ 0.66
CTNS-203ENST00000399306 PRDM12Q9H4Q4 367 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 CERS4Q9HA82 394 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 MTUS1Q9ULD2 1270 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 CDH23Q9H251 3354 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 PLXNA4Q9HCM2 1894 aa19.18■□□□□ 0.66
CTNS-203ENST00000399306 CLIC2O15247 247 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 EXOC3O60645 756 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 EFEMP2O95967 443 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 BMP6P22004 513 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 CCNE1P24864 410 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 OR1G1P47890 313 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 MCCD1P59942 119 aaPredicted RBP19.17■□□□□ 0.66
CTNS-203ENST00000399306 TMEM132DQ14C87 1099 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 DCLRE1AQ6PJP8 1040 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 Q7L0L9 218 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 ZC3H3Q8IXZ2 948 aaKnown RBP19.17■□□□□ 0.66
CTNS-203ENST00000399306 SMYD4Q8IYR2 804 aaPredicted RBP19.17■□□□□ 0.66
CTNS-203ENST00000399306 BEST2Q8NFU1 509 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 CACTINQ8WUQ7 758 aaKnown RBP19.17■□□□□ 0.66
CTNS-203ENST00000399306 MRPL38Q96DV4 380 aaKnown RBP19.17■□□□□ 0.66
CTNS-203ENST00000399306 MFSD14AQ96MC6 490 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 TSG101Q99816 390 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 MKNK1Q9BUB5 465 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 CXCL16Q9H2A7 254 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
CTNS-203ENST00000399306 PPP1R3GB7ZBB8 358 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 CYP2J2P51589 502 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 ELAVL2Q12926 359 aaKnown RBP19.16■□□□□ 0.66
CTNS-203ENST00000399306 BMS1Q14692 1282 aaKnown RBP19.16■□□□□ 0.66
CTNS-203ENST00000399306 PSMD6Q15008 389 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 UPP1Q16831 310 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 GLRA4Q5JXX5 417 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 CCDC183Q5T5S1 534 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 RNF168Q8IYW5 571 aaPredicted RBP19.16■□□□□ 0.66
CTNS-203ENST00000399306 MLKLQ8NB16 471 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 GDPD5Q8WTR4 605 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 POF1BQ8WVV4 589 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 NGRNQ9NPE2 291 aaKnown RBP19.16■□□□□ 0.66
CTNS-203ENST00000399306 MARCH5Q9NX47 278 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 FRMD4BQ9Y2L6 1034 aa19.16■□□□□ 0.66
CTNS-203ENST00000399306 PRRC2BQ5JSZ5 2229 aaKnown RBP19.15■□□□□ 0.66
CTNS-203ENST00000399306 BICDL2A1A5D9 508 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 GOLGA8IPA6NC78 632 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 GOLGA8JA6NMD2 632 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 GRM6O15303 877 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 NR2F2P24468 414 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 FKBP3Q00688 224 aaKnown RBP19.15■□□□□ 0.66
CTNS-203ENST00000399306 SOX4Q06945 474 aaPredicted RBP19.15■□□□□ 0.66
CTNS-203ENST00000399306 CYP24A1Q07973 514 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 JADE1Q6IE81 842 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 USP37Q86T82 979 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 CBWD2Q8IUF1 395 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 ZSWIM2Q8NEG5 633 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 SYAP1Q96A49 352 aaPredicted RBP19.15■□□□□ 0.66
CTNS-203ENST00000399306 FAM161BQ96MY7 647 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 TLR9Q9NR96 1032 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 SSX2IPQ9Y2D8 614 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 IRAK3Q9Y616 596 aa19.15■□□□□ 0.66
CTNS-203ENST00000399306 CASTOR2A6NHX0 329 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 NT5C1B-RDH14C9J2C7 533 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 FSCN2O14926 492 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 CETN3O15182 167 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 TRAPPC3O43617 180 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 SOD2P04179 222 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 PBX3P40426 434 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 AP3M2P53677 418 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 CLDN10P78369 228 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 ADAM9Q13443 819 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 ADGRE1Q14246 886 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms