RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ZFYVE1Q9HBF4 777 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 ESYT3A0FGR9 886 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 TRIM49BA6NDI0 452 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 TK2O00142 265 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 FGFR4P22455 802 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 RPS6P62753 249 aaKnown RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 USP39Q53GS9 565 aaKnown RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 CNPY4Q8N129 248 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.22□□□□□ -0.45
HLCS-202ENST00000399120 CCT7Q99832 543 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 NPHS2Q9NP85 383 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 UVRAGQ9P2Y5 699 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 FEM1BQ9UK73 627 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 ABCB11O95342 1321 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 SYCP2Q9BX26 1530 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 MYL2P10916 166 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 EPB42P16452 691 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 NCKAP1LP55160 1127 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 PLOD1Q02809 727 aaPredicted RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 ARHGEF7Q14155 803 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 UGP2Q16851 508 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 C10orf53Q8N6V4 93 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 TNIP3Q96KP6 325 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 SMG5Q9UPR3 1016 aaKnown RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 KLC1Q07866 573 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 CSTF3Q12996 717 aaKnown RBP12.22□□□□□ -0.45
HLCS-202ENST00000399120 CCDC81Q6ZN84 652 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 RAD18Q9NS91 495 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 MRGBPQ9NV56 204 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 ADGRA2Q96PE1 1338 aa12.22□□□□□ -0.45
HLCS-202ENST00000399120 EVPLLA8MZ36 301 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
HLCS-202ENST00000399120 DLGAP3O95886 979 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 GRK2P25098 689 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 SFNP31947 248 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 AP3M2P53677 418 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 DAB2IPQ5VWQ8 1189 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 PTPRN2Q92932 1015 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 RAVER2Q9HCJ3 691 aaKnown RBP12.21□□□□□ -0.45
HLCS-202ENST00000399120 KRCC1Q9NPI7 259 aaPredicted RBP12.21□□□□□ -0.45
HLCS-202ENST00000399120 SOX11P35716 441 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 SYDE1Q6ZW31 735 aaPredicted RBP12.21□□□□□ -0.45
HLCS-202ENST00000399120 AGAP3Q96P47 875 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 CYP2D7A0A087X1C5 515 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
HLCS-202ENST00000399120 PWP1Q13610 501 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 TMEM154Q6P9G4 183 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 AGGF1Q8N302 714 aaeCLIP12.21□□□□□ -0.45
HLCS-202ENST00000399120 VPS37AQ8NEZ2 397 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 CENPTQ96BT3 561 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 BRD8Q9H0E9 1235 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 TASP1Q9H6P5 420 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 SYBUQ9NX95 663 aa12.21□□□□□ -0.45
HLCS-202ENST00000399120 SSTR3P32745 418 aaPredicted RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 EIF2B5Q13144 721 aaKnown RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 SIKE1Q9BRV8 207 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 UTP6Q9NYH9 597 aaKnown RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 RBAKQ9NYW8 714 aaPredicted RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 TMEM191CA6NGB0 347 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 FOXP2O15409 715 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 KLHL2O95198 593 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 PLEKHA8P1O95397 391 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 FYNP06241 537 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 SERPINB9P50453 376 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 KCNK10P57789 538 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 GPD1LQ8N335 351 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.46
HLCS-202ENST00000399120 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 SEC31BQ9NQW1 1179 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 ZNF518AQ6AHZ1 1483 aa12.21□□□□□ -0.46
HLCS-202ENST00000399120 POTEMA6NI47 508 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 AIM2O14862 343 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 MAP3K13O43283 966 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 GH2P01242 217 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 HOXD10P28358 340 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 RGS4P49798 205 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 ALDH6A1Q02252 535 aaKnown RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 ATPAF2Q8N5M1 289 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 RBBP8Q99708 897 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 SH3GL1Q99961 368 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 IMPAD1Q9NX62 359 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 XPO1O14980 1071 aaKnown RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 ZBTB5O15062 677 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 LIFRP42702 1097 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 GUCA1AP43080 201 aaPredicted RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 PTRHD1Q6GMV3 140 aaKnown RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 SWSAP1Q6NVH7 229 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 CCDC60Q8IWA6 550 aaPredicted RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 HDAC6Q9UBN7 1215 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms