RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PTENP60484 403 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PPP2R5EQ16537 467 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DAB2IPQ5VWQ8 1189 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DNAJC24Q6P3W2 148 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SNF8Q96H20 258 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 KLHL14Q9P2G3 628 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 NALCNQ8IZF0 1738 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ICAM1P05362 532 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ETS1P14921 441 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 EZRP15311 586 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 HOXD13P35453 343 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PTGIRP43119 386 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 RAB15P59190 212 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 IRX4P78413 519 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CDR2Q01850 454 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 MAPK7Q13164 816 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SPDYE2Q495Y8 402 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ERICH1Q86X53 443 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ASAP3Q8TDY4 903 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CFAP57Q96MR6 1250 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ATP2A1O14983 1001 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CCNE2O96020 404 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM191BP0C7N4 346 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CYP11B1P15538 503 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 RRM1P23921 792 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 BPIFB4P59827 614 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PDIA2Q13087 525 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 EMC2Q15006 297 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 GADL1Q6ZQY3 521 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 HSPH1Q92598 858 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 KREMEN1Q96MU8 473 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 UVRAGQ9P2Y5 699 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 AGO2Q9UKV8 859 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CES2O00748 559 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 P4HA2O15460 535 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 LACTBP83111 547 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PGM5Q15124 567 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ZNF449Q6P9G9 518 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 C4orf19Q8IY42 314 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 MORC4Q8TE76 937 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 NSUN6Q8TEA1 469 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CDC42EP4Q9H3Q1 356 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CTNNAL1Q9UBT7 734 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TBX20Q9UMR3 447 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 F5H423 210 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 H7C0C1 242 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TNNC2P02585 160 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ITIH2P19823 946 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 GNA15P30679 374 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ATP5OP48047 213 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 YWHAGP61981 247 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PRKCEQ02156 737 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SPATA21Q7Z572 469 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CTAGE3PQ8IX95 158 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 MICALL2Q8IY33 904 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TMC2Q8TDI7 906 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TPX2Q9ULW0 747 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SYNGAP1Q96PV0 1343 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ASNSP08243 561 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SRGAP2CP0DJJ0 459 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 RALAP11233 206 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 GTF2H1P32780 548 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 AUHQ13825 339 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SLC15A2Q16348 729 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 HADHQ16836 314 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ZBED8Q8IZ13 594 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ZNF513Q8N8E2 541 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 C1orf131Q8NDD1 294 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CFAP36Q96G28 342 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CHRNB2P17787 502 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 DRD4P21917 467 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SFNP31947 248 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 MRPS9P82933 396 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TFAMQ00059 246 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 SV2AQ7L0J3 742 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 WRNIP1Q96S55 665 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 LBHD1Q9BQE6 289 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CARD9Q9H257 536 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PABPC3Q9H361 631 aaKnown RBP5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PLIN4Q96Q06 1357 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 BANF1O75531 89 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CYP24A1Q07973 514 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 CYP4A22Q5TCH4 519 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 ZBTB8OSQ8IWT0 167 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 MCOLN2Q8IZK6 566 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM8AQ9HCN3 771 aa5.24□□□□□ -1.57
SMAD4-202ENST00000398417 PFASO15067 1338 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 UBE4BO95155 1302 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM120BA0PK00 339 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SHOX2O60902 331 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CYP1A2P05177 515 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 VCAM1P19320 739 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 BASP1P80723 227 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CCDC6Q16204 474 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 P3H1Q32P28 736 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ANKRD20A8PQ5CZ79 823 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ZDHHC24Q6UX98 284 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms