RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 FAN1Q9Y2M0 1017 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 KIAA0391O15091 583 aaKnown RBP27.56■■■□□ 2
TMEM55B-202ENST00000398020 GRM6O15303 877 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 CALUO43852 315 aaPredicted RBP27.56■■■□□ 2
TMEM55B-202ENST00000398020 LPXNO60711 386 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 NR3C1P04150 777 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 COBLL1Q53SF7 1204 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 C12orf56Q8IXR9 622 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 GTPBP4Q9BZE4 634 aaKnown RBP27.56■■■□□ 2
TMEM55B-202ENST00000398020 TUBGCP4Q9UGJ1 667 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 EXOC3O60645 756 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 ADRB2P07550 413 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 NFICP08651 508 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 ADGRE1Q14246 886 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 SNRNP35Q16560 246 aaKnown RBP27.56■■■□□ 2
TMEM55B-202ENST00000398020 KLHL10Q6JEL2 608 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 BRSK2Q8IWQ3 736 aa27.56■■■□□ 2
TMEM55B-202ENST00000398020 ZNF233A6NK53 670 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 DNAJB1P25685 340 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 PPM1AP35813 382 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 ZCWPW2Q504Y3 356 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 FBXL18Q96ME1 805 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 SLC38A7Q9NVC3 462 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 REV3LO60673 3130 aa27.55■■■□□ 2
TMEM55B-202ENST00000398020 PPP1R3GB7ZBB8 358 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 CLCNKBP51801 687 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 GUCY2FP51841 1108 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 PMS1P54277 932 aaKnown RBP27.54■■■□□ 2
TMEM55B-202ENST00000398020 STIM1Q13586 685 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 TRIML1Q8N9V2 468 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 SPPL3Q8TCT6 385 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 HASPINQ8TF76 798 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 EEF2KMTQ96G04 330 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 TMEM169Q96HH4 297 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 IGSF21Q96ID5 467 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 FAM84AQ96KN4 292 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 KIAA1586Q9HCI6 787 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 PDE11AQ9HCR9 933 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 DMAC2Q9NW81 257 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 MARCH5Q9NX47 278 aa27.54■■■□□ 2
TMEM55B-202ENST00000398020 TRIM49BA6NDI0 452 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 IGFBP4P22692 258 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 NR2F2P24468 414 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 CASP4P49662 377 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 CENPPQ6IPU0 288 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 CD302Q8IX05 232 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 POF1BQ8WVV4 589 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 ASB7Q9H672 318 aa27.53■■■□□ 2
TMEM55B-202ENST00000398020 IL18RAPO95256 599 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 IGFBP6P24592 240 aaPredicted RBP27.52■■■□□ 2
TMEM55B-202ENST00000398020 TMEM132DQ14C87 1099 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 ZBTB6Q15916 424 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 CEP135Q66GS9 1140 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 ANKRD40Q6AI12 368 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 SLC9A9Q8IVB4 645 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 EFCAB13Q8IY85 973 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 GAS2L1Q99501 681 aaPredicted RBP27.52■■■□□ 2
TMEM55B-202ENST00000398020 PSMA7O14818 248 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 POU5F1Q01860 360 aaKnown RBP27.52■■■□□ 2
TMEM55B-202ENST00000398020 PLCB3Q01970 1234 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 KRT17Q04695 432 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 HSP90AA2PQ14568 343 aaPredicted RBP27.52■■■□□ 2
TMEM55B-202ENST00000398020 TMEM63CQ9P1W3 806 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 CTNND2Q9UQB3 1225 aa27.52■■■□□ 2
TMEM55B-202ENST00000398020 KIF4AO95239 1232 aa27.51■■□□□ 1.99
TMEM55B-202ENST00000398020 LMBRD2Q68DH5 695 aaPredicted RBP27.51■■□□□ 1.99
TMEM55B-202ENST00000398020 COLEC11Q9BWP8 271 aa27.51■■□□□ 1.99
TMEM55B-202ENST00000398020 UBQLN1Q9UMX0 589 aaKnown RBP27.51■■□□□ 1.99
TMEM55B-202ENST00000398020 ADAM9Q13443 819 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 CAMK1Q14012 370 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 UPP1Q16831 310 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 CCDC183Q5T5S1 534 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 CAVIN1Q6NZI2 390 aaKnown RBP27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 NELFBQ8WX92 580 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 CCDC127Q96BQ5 260 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 DHTKD1Q96HY7 919 aaPredicted RBP27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 VN1R3Q9BXE9 311 aa27.5■■□□□ 1.99
TMEM55B-202ENST00000398020 CCNE1P24864 410 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 TFAMQ00059 246 aaKnown RBP27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 CYP24A1Q07973 514 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 EDRF1Q3B7T1 1238 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 C3orf58Q8NDZ4 430 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 TMEM174Q8WUU8 243 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 TSG101Q99816 390 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 DERAQ9Y315 318 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 C2CD2Q9Y426 696 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 PCDHGC5Q9Y5F6 944 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 PTPRJQ12913 1337 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 CARNS1A5YM72 827 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 PODXLO00592 558 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 TADA2AO75478 443 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 B3GAT3O94766 335 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 DLATP10515 647 aaKnown RBP27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 FOSL2P15408 326 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 STX17P56962 302 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 ERVFC1P60507 584 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 MYBPC2Q14324 1141 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 NFIL3Q16649 462 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 SPATA1Q5VX52 437 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 BEST2Q8NFU1 509 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms