RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 POU2F2P09086 479 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 MCF2P10911 925 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 CDC25AP30304 524 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 NBL1P41271 181 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 OSTNP61366 133 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 ZRSR1Q15695 479 aaKnown RBP15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 UPP1Q16831 310 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 RINT1Q6NUQ1 792 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 ANKS3Q6ZW76 656 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 DDX27Q96GQ7 796 aaKnown RBP15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 TARS2Q9BW92 718 aaKnown RBP15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 PTPRHQ9HD43 1115 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 CDH7Q9ULB5 785 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 CDY1Q9Y6F8 540 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 NUMBLQ9Y6R0 609 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 KRBA1A5PL33 1030 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 GUCY2CP25092 1073 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 TKTP29401 623 aaKnown RBP15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 NTHL1P78549 312 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 ATP2C1P98194 919 aaPredicted RBP15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 STRN3Q13033 797 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 MAPK7Q13164 816 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 IL17AQ16552 155 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 UVSSAQ2YD98 709 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 MPZL3Q6UWV2 235 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 C1orf186Q6ZWK4 172 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 MTSS1LQ765P7 747 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 RTL10Q7L3V2 364 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 KCNK18Q7Z418 384 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 DTWD2Q8NBA8 298 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 GPR152Q8TDT2 470 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 SNX27Q96L92 541 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 MMTAG2Q9BU76 263 aaKnown RBP15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 TBC1D17Q9HA65 648 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 ARHGEF3Q9NR81 526 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 BACE2Q9Y5Z0 518 aa15.65■□□□□ 0.1
SNRNP25-203ENST00000397876 H3BQV1 296 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 I3L4J1 428 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 PODXLO00592 558 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 SLC16A4O15374 487 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 HARSP12081 509 aaKnown RBP15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 PROZP22891 400 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 BRCC3P46736 316 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 SOX4Q06945 474 aaPredicted RBP15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 ANGPT1Q15389 498 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 XKR4Q5GH76 650 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 ALKAL1Q6UXT8 129 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 USP34Q70CQ2 3546 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 KCTD17Q8N5Z5 321 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 C3orf58Q8NDZ4 430 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 ACAP3Q96P50 834 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 SLC2A4RGQ9NR83 387 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 ANKFY1Q9P2R3 1169 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 TRIP11Q15643 1979 aa15.64■□□□□ 0.09
SNRNP25-203ENST00000397876 PRR23AA6NEV1 266 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 PLS3P13797 630 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 KCNE1P15382 129 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 IGFBP6P24592 240 aaPredicted RBP15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 SMTNP53814 917 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 RAD51AP2Q09MP3 1159 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 NOLC1Q14978 699 aaKnown RBP eCLIP15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 PABPC1LQ4VXU2 614 aaKnown RBP15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 HYIQ5T013 277 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 PHLDB3Q6NSJ2 640 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 CD300LGQ6UXG3 332 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 FRMD5Q7Z6J6 570 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 SPIRE2Q8WWL2 714 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 FGF13Q92913 245 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 FGF14Q92915 247 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 NKD2Q969F2 451 aaPredicted RBP15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 ZMAT2Q96NC0 199 aaKnown RBP15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 KCND2Q9NZV8 630 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 CNTN3Q9P232 1028 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 NUB1Q9Y5A7 615 aa15.63■□□□□ 0.09
SNRNP25-203ENST00000397876 VWA3AA6NCI4 1184 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 SFI1A8K8P3 1242 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 ABLIM1O14639 778 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 SYN3O14994 580 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 TOM1L1O75674 476 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 RPL9P32969 192 aaKnown RBP15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 VARS2Q5ST30 1063 aaKnown RBP15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 SLC8B1Q6J4K2 584 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 PARM1Q6UWI2 310 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 ASCL5Q7RTU5 278 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 ST13P5Q8NFI4 369 aaPredicted RBP15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 ITFG1Q8TB96 612 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 TMX3Q96JJ7 454 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 PNMA5Q96PV4 448 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 NTPCRQ9BSD7 190 aaKnown RBP15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 HCFC1R1Q9NWW0 138 aa15.62■□□□□ 0.09
SNRNP25-203ENST00000397876 CITO14578 2027 aa15.61■□□□□ 0.09
SNRNP25-203ENST00000397876 H0YCG3 227 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms