RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 IQCKQ8N0W5 287 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 MRPL1Q9BYD6 325 aaKnown RBP9.56□□□□□ -0.88
TRPM1-202ENST00000397795 EML4Q9HC35 981 aaKnown RBP9.56□□□□□ -0.88
TRPM1-202ENST00000397795 CACNA2D2Q9NY47 1150 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 ERAP1Q9NZ08 941 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 MLXQ9UH92 298 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 PFDN2Q9UHV9 154 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 PLCL2Q9UPR0 1127 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 C1orf232A0A0U1RR37 186 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 VWA5AO00534 786 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 ALOX5P09917 674 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 PAMP19021 973 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 PIK3CAP42336 1068 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 MAGEA2P43356 314 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 RPS6P62753 249 aaKnown RBP9.56□□□□□ -0.88
TRPM1-202ENST00000397795 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 STX5Q13190 355 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 AOC3Q16853 763 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 C15orf59Q2T9L4 293 aaPredicted RBP9.56□□□□□ -0.88
TRPM1-202ENST00000397795 HABP4Q5JVS0 413 aaKnown RBP9.56□□□□□ -0.88
TRPM1-202ENST00000397795 CYB5RLQ6IPT4 315 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 TSHZ1Q6ZSZ6 1077 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 STK32CQ86UX6 486 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 CLHC1Q8NHS4 586 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 HDAC7Q8WUI4 952 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 PLEKHA8Q96JA3 519 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 C1orf50Q9BV19 199 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 SAYSD1Q9NPB0 183 aa9.56□□□□□ -0.88
TRPM1-202ENST00000397795 LINC00854A0A1B0GVQ3 168 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 PIK3R2O00459 728 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 RAD51CO43502 376 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 ANXA1P04083 346 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 KRT1P04264 644 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 DRD4P21917 467 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 GSTA3Q16772 222 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 FASTKD1Q53R41 847 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 DARS2Q6PI48 645 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 SETD3Q86TU7 594 aaPredicted RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 HDHD2Q9H0R4 259 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 KDSRQ06136 332 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 IMPG1Q17R60 797 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 RNF220Q5VTB9 566 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 PRUNE1Q86TP1 453 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 C12orf4Q9NQ89 552 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 RAD51BO15315 384 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 PEX14O75381 377 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 OASLQ15646 514 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 XAGE2Q96GT9 111 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 VPS50Q96JG6 964 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 DBNDD2Q9BQY9 259 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 LZTS2Q9BRK4 669 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 DDX47Q9H0S4 455 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 MYLK2Q9H1R3 596 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 LMCD1Q9NZU5 365 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 MTO1Q9Y2Z2 717 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 MRC2Q9UBG0 1479 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 SALL3Q9BXA9 1300 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 SNX2O60749 519 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 SERPING1P05155 500 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 GTF2H1P32780 548 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 MZT2BQ6NZ67 158 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 TXNDC11Q6PKC3 985 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 C4orf50Q6ZRC1 276 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 COL23A1Q86Y22 540 aaPredicted RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 EIF1ADQ8N9N8 165 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 NUDT16Q96DE0 195 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 MS4A14Q96JA4 679 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 RHOBTB2Q9BYZ6 727 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 FAM32AQ9Y421 112 aaKnown RBP9.55□□□□□ -0.88
TRPM1-202ENST00000397795 SPEF1Q9Y4P9 236 aa9.55□□□□□ -0.88
TRPM1-202ENST00000397795 ZNF862O60290 1169 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 CALB1P05937 261 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 IL15P40933 162 aaPredicted RBP9.54□□□□□ -0.88
TRPM1-202ENST00000397795 CSE1LP55060 971 aaKnown RBP9.54□□□□□ -0.88
TRPM1-202ENST00000397795 GET4Q7L5D6 327 aaPredicted RBP9.54□□□□□ -0.88
TRPM1-202ENST00000397795 TMEM161AQ9NX61 479 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 RPS6KL1Q9Y6S9 549 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 USP42Q9H9J4 1324 aaKnown RBP9.54□□□□□ -0.88
TRPM1-202ENST00000397795 GYS1P13807 737 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 XPAP23025 273 aaPredicted RBP9.54□□□□□ -0.88
TRPM1-202ENST00000397795 SOX5P35711 763 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 CASP4P49662 377 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 MFAP3P55082 362 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 ITGA1P56199 1179 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 P3H1Q32P28 736 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRPM1-202ENST00000397795 SMARCAL1Q9NZC9 954 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 FAM187AA6NFU0 413 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 APOA4P06727 396 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 GLI1P08151 1106 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 TNNI1P19237 187 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 CYP7A1P22680 504 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 STARP49675 285 aa9.54□□□□□ -0.88
TRPM1-202ENST00000397795 ALDH18A1P54886 795 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms