RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FRMPD3Q5JV73 1810 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 EPHB6O15197 1021 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 P4HA2O15460 535 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 PON1P27169 355 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 GTF2H1P32780 548 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 WNT7BP56706 349 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 CDK17Q00537 523 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 CCDC170Q8IYT3 715 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 SEZ6LQ9BYH1 1024 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 TMEM117Q9H0C3 514 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 TOPORSQ9NS56 1045 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 AGPAT5Q9NUQ2 364 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 NOC2LQ9Y3T9 749 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 A0A1W2PQJ5 194 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 TFRCP02786 760 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 MXI1P50539 228 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 CETN1Q12798 172 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 TRIM71Q2Q1W2 868 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 TAF3Q5VWG9 929 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 SLC27A1Q6PCB7 646 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 FAM228AQ86W67 206 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 TMEM8AQ9HCN3 771 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 PLCB1Q9NQ66 1216 aa20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 PIN4Q9Y237 131 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-204ENST00000397760 PMM2O15305 246 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 SGPL1O95470 568 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 CLTAP09496 248 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 STAG3L1P0CL83 205 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 ACTN1P12814 892 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 TNNI1P19237 187 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 CLDN10P78369 228 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 APBA1Q02410 837 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 KYAT1Q16773 422 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 DCAF4L1Q3SXM0 396 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 KRT39Q6A163 491 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 APBB1IPQ7Z5R6 666 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 TMEM192Q8IY95 271 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 U2AF1L4Q8WU68 220 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 FAM212AQ96EL1 285 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 CRISPLD2Q9H0B8 497 aa20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 RPF1Q9H9Y2 349 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-204ENST00000397760 ERLIN1O75477 346 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 RPS6KA5O75582 802 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 NOL4O94818 638 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 NPTXRO95502 500 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 CDK7P50613 346 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 ZBED6P86452 979 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 LMBRD2Q68DH5 695 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 ZNF516Q92618 1163 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 ZNHIT6Q9NWK9 470 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 BRCA2P51587 3418 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 CYLC1P35663 651 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 AMPD2Q01433 879 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 SURF1Q15526 300 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 ENOX2Q16206 610 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 KLHDC7AQ5VTJ3 777 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 DPY19L2P1Q6NXN4 242 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 SV2AQ7L0J3 742 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 CGRRF1Q99675 332 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 FUT8Q9BYC5 575 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 EDEM3Q9BZQ6 932 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 INTS2Q9H0H0 1204 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 GANQ9H2C0 597 aa20.85■□□□□ 0.93
PDLIM2-204ENST00000397760 CTAGE15A4D2H0 777 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 RBAK-RBAKDNI3L0D1 243 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 CAND2O75155 1236 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 CTAGE8P0CG41 777 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 POLR2FP61218 127 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 EPC2Q52LR7 807 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 CACNA2D4Q7Z3S7 1137 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 CTAGE6Q86UF2 777 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 CTAGE4Q8IX94 777 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 EIF2AQ9BY44 585 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 SIX2Q9NPC8 291 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 CEP72Q9P209 647 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 ST3GAL5Q9UNP4 418 aa20.84■□□□□ 0.93
PDLIM2-204ENST00000397760 A0A0U1RQJ8 604 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 MAP2K7O14733 419 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 CXCL8P10145 99 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 POU5F1Q01860 360 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 FAM26DQ5JW98 314 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 ZNF618Q5T7W0 954 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 LMO3Q8TAP4 145 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 ATRIPQ8WXE1 791 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 FAM84AQ96KN4 292 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 RPGRIP1Q96KN7 1286 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 CHP1Q99653 195 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 ANKZF1Q9H8Y5 726 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 NLRC4Q9NPP4 1024 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 MYO6Q9UM54 1294 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 REXO2Q9Y3B8 237 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 DNAH12Q6ZR08 3092 aa20.83■□□□□ 0.93
PDLIM2-204ENST00000397760 PTPRJQ12913 1337 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 EIF3CLB5ME19 914 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 GPR182O15218 404 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 SEC31AO94979 1220 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 IL18RAPO95256 599 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 CKBP12277 381 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 GRM5P41594 1212 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms