RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 LIMA1Q9UHB6 759 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-203ENST00000397709 SLC4A7Q9Y6M7 1214 aa21.1■□□□□ 0.97
MAP1LC3A-203ENST00000397709 CEP290O15078 2479 aa21.1■□□□□ 0.97
MAP1LC3A-203ENST00000397709 DGKIO75912 1065 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 GATMP50440 423 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 SCNN1GP51170 649 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 TMEM132DQ14C87 1099 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 KRT31Q15323 416 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 ZBTB6Q15916 424 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 DCAF17Q5H9S7 520 aaPredicted RBP21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 NOMO2Q5JPE7 1267 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 GLRA4Q5JXX5 417 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 APTXQ7Z2E3 356 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 TMCO2Q7Z6W1 182 aaPredicted RBP21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 CREBRFQ8IUR6 639 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 CASD1Q96PB1 797 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 PPP1R10Q96QC0 940 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 POP1Q99575 1024 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 INTS13Q9NVM9 706 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 PLAGL2Q9UPG8 496 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 INPP5FQ9Y2H2 1132 aa21.09■□□□□ 0.97
MAP1LC3A-203ENST00000397709 CDK11BP21127 795 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 MLLT1Q03111 559 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 GRIK3Q13003 919 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 SHHQ15465 462 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 NAB2Q15742 525 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 MAN2A1Q16706 1144 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 LMBRD2Q68DH5 695 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 ABI1Q8IZP0 508 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 ANKRD20A12PQ8NF67 263 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 URGCPQ8TCY9 931 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 ZNF516Q92618 1163 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 ZNF689Q96CS4 500 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 KIF12Q96FN5 646 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 TUBGCP2Q9BSJ2 902 aa21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 UBE2OQ9C0C9 1292 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.08■□□□□ 0.97
MAP1LC3A-203ENST00000397709 TDRD15B5MCY1 1934 aaKnown RBP21.08■□□□□ 0.96
MAP1LC3A-203ENST00000397709 LRRC10BA6NIK2 292 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 GJB5O95377 273 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 POMCP01189 267 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 THP07101 528 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TNNI1P19237 187 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 GTF2H1P32780 548 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 BMP8BP34820 402 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 AP3M2P53677 418 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 PPP3CAQ08209 521 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TCERG1LQ5VWI1 586 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 OR5B17Q8NGF7 314 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 FAM84AQ96KN4 292 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 RNPC3Q96LT9 517 aaKnown RBP21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TBC1D13Q9NVG8 400 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TAB2Q9NYJ8 693 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 KANSL3Q9P2N6 904 aa21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 UBQLN1Q9UMX0 589 aaKnown RBP21.07■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TBKBP1A7MCY6 615 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TULP1O00294 542 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 STX10O60499 249 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 AFPP02771 609 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 PRKCSHP14314 528 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 ATP2A2P16615 1042 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CYP3A5P20815 502 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 COPB1P53618 953 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 HTRA4P83105 476 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TFAMQ00059 246 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 DUOXA2Q1HG44 320 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 MIIPQ5JXC2 388 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 FAM117BQ6P1L5 589 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 C15orf39Q6ZRI6 1047 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 HERC6Q8IVU3 1022 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CACTINQ8WUQ7 758 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 C18orf25Q96B23 403 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 MRPL9Q9BYD2 267 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 MTMR12Q9C0I1 747 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 SLC38A7Q9NVC3 462 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TUBGCP4Q9UGJ1 667 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 PDE4DIPQ5VU43 2346 aa21.06■□□□□ 0.96
MAP1LC3A-203ENST00000397709 XPOTO43592 962 aaKnown RBP21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 C4BPAP04003 597 aaKnown RBP21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TMEM191BP0C7N4 346 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 GCLMP48507 274 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 SOX4Q06945 474 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 KCNH2Q12809 1159 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 VWA3BQ502W6 1294 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 BEST2Q8NFU1 509 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 ANKRD36BP1Q96IX9 119 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TMEM8AQ9HCN3 771 aa21.05■□□□□ 0.96
MAP1LC3A-203ENST00000397709 PMM2O15305 246 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TNNC2P02585 160 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 FMO5P49326 533 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 MXI1P50539 228 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 GUCY2FP51841 1108 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 FANCCQ00597 558 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 DSC1Q08554 894 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 ZACNQ401N2 412 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CBWD6Q4V339 395 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CBWD3Q5JTY5 395 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CBWD5Q5RIA9 395 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TDRD10Q5VZ19 366 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms