RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 NGRNQ9NPE2 291 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 ASNSD1Q9NWL6 643 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 KANSL3Q9P2N6 904 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 MROH7Q68CQ1 1323 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 MIF4GDA9UHW6 222 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 EVI5O60447 810 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 IFNB1P01574 187 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 MAN1A1P33908 653 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 LMNB2Q03252 620 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GLRA4Q5JXX5 417 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 TRIM65Q6PJ69 517 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 PHLDB2Q86SQ0 1253 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 NT5DC4Q86YG4 428 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 SPATA2LQ8IUW3 424 aaPredicted RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 GABPB2Q8TAK5 448 aaPredicted RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 PBKQ96KB5 322 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 DEFB118Q96PH6 123 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 STMN4Q9H169 189 aaPredicted RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 CDC23Q9UJX2 597 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 ZNF831Q5JPB2 1677 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 B3GAT3O94766 335 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 KRT1P04264 644 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 SMPD1P17405 629 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 SDC4P31431 198 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GBP1P32455 592 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 FXR1P51114 621 aaKnown RBP eCLIP8.82□□□□□ -1
PTPRD-204ENST00000397606 TAP1Q03518 808 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GRB14Q14449 540 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 ZNF677Q86XU0 584 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 TMEM161BQ8NDZ6 487 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 DDX27Q96GQ7 796 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 TRIM31Q9BZY9 425 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 AGPAT5Q9NUQ2 364 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 DONSONQ9NYP3 566 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 HDAC6Q9UBN7 1215 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 SRRDQ9UH36 339 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 MAFBQ9Y5Q3 323 aaPredicted RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 FAM169AQ9Y6X4 670 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GOLGA6CA6NDK9 693 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GOLGA6BA6NDN3 693 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 KLRC4O43908 158 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GOLGA6DP0CG33 693 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 ZNF18P17022 549 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 ATICP31939 592 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 MRPS6P82932 125 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 CUL2Q13617 745 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 SLC18A3Q16572 532 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 KAZNQ674X7 775 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 PLCB1Q9NQ66 1216 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 GOLGA6AQ9NYA3 693 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 WDR35Q9P2L0 1181 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 ENC1O14682 589 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 FTCDO95954 541 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 CXCL8P10145 99 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 CAPSQ13938 189 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 MAPRE1Q15691 268 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 NBPF20Q3BBV1 942 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 FIGNQ5HY92 759 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 TRAPPC11Q7Z392 1133 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 RFX6Q8HWS3 928 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 BRSK2Q8IWQ3 736 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 KCTD6Q8NC69 237 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 TMEM169Q96HH4 297 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 CELF4Q9BZC1 486 aaKnown RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 TNFSF13BQ9Y275 285 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 PRG3Q9Y2Y8 225 aaPredicted RBP8.82□□□□□ -1
PTPRD-204ENST00000397606 ADGRG1Q9Y653 693 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 COMMD10Q9Y6G5 202 aa8.82□□□□□ -1
PTPRD-204ENST00000397606 SMIM35A0A1B0GVV1 85 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 LRRD1A4D1F6 860 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 PABPN1LA6NDY0 278 aaKnown RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 PGRMC1O00264 195 aaKnown RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 RTN2O75298 545 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 ODC1P11926 461 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 PMS1P54277 932 aaKnown RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 RWDD2BP57060 319 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 KRT17Q04695 432 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 ECM1Q16610 540 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 LEKR1Q6ZMV7 388 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 SV2AQ7L0J3 742 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 UBE2Q2Q8WVN8 375 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 PI4K2AQ9BTU6 479 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 CALN1Q9BXU9 219 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 RNPEPQ9H4A4 650 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 POLIQ9UNA4 740 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 ZNF148Q9UQR1 794 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 TTLL3Q9Y4R7 772 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 TAF1P21675 1872 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 OPA1O60313 960 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 WEE2P0C1S8 567 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 PON1P27169 355 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 GNL1P36915 607 aaPredicted RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 PTENP60484 403 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 SARNPP82979 210 aaKnown RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 OLFML2BQ68BL8 750 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 ZNF771Q7L3S4 317 aaPredicted RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 HOMER3Q9NSC5 361 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms