RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 LPIN1Q14693 890 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 MAP3K20Q9NYL2 800 aaKnown RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 LSM7Q9UK45 103 aaKnown RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 KCNQ4P56696 695 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 TMC5Q6UXY8 1006 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 C19orf18Q8NEA5 215 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 ESYT3A0FGR9 886 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 CHRM3P20309 590 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 FGFR4P22455 802 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 KLHL1Q9NR64 748 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 APOL1O14791 398 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 CTSHP09668 335 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 KPNA1P52294 538 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 NRG3P56975 720 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 FAM45BPQ6NSW5 357 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PARP9Q8IXQ6 854 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PMM1Q92871 262 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 ADI1Q9BV57 179 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 CYP39A1Q9NYL5 469 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 NCK2O43639 380 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 CCDC22O60826 627 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 NUDT14O95848 222 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 ZNF618Q5T7W0 954 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PPP2R3CQ969Q6 453 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 RNFT2Q96EX2 444 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 CAAP1Q9H8G2 361 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 USP19O94966 1318 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 EVPLLA8MZ36 301 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 CLUP10909 449 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 GGCXP38435 758 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 HNRNPH2P55795 449 aaKnown RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PUDPQ08623 228 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 TRIM16LQ309B1 348 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 IRAK1BP1Q5VVH5 260 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 ZNF564Q8TBZ8 553 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 PRMT1Q99873 361 aaKnown RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 DDX50Q9BQ39 737 aaKnown RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 GPR63Q9BZJ6 419 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PSMC3P17980 439 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 PTPN7P35236 360 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 ARSEP51690 589 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 CNDP1Q96KN2 507 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 NDST4Q9H3R1 872 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 MAP3K13O43283 966 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 GUCY1A2P33402 732 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 RSBN1Q5VWQ0 802 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 ZNF512Q96ME7 567 aaPredicted RBP12.94□□□□□ -0.34
SMU1-201ENST00000397149 GOLPH3LQ9H4A5 285 aa12.94□□□□□ -0.34
SMU1-201ENST00000397149 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 LRRC14BA6NHZ5 514 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 TNNI3P19429 210 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 RGS7P49802 495 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 HSD17B4P51659 736 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 NME5P56597 212 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 GPC5P78333 572 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 MTMR1Q13613 665 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 MDM1Q8TC05 714 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 RAET1EQ8TD07 263 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 THUMPD3Q9BV44 507 aaKnown RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 SH3GLB1Q9Y371 365 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 ABCB11O95342 1321 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 USP17L3A6NCW0 530 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 USP17L4A6NCW7 530 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 RPN2P04844 631 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 PHKA1P46020 1223 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CYLC2Q14093 348 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 SNX30Q5VWJ9 437 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 USP17L1Q7RTZ2 530 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 RHOT2Q8IXI1 618 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 COPS7BQ9H9Q2 264 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 FLT4P35916 1363 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CDC27P30260 824 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 ADORA1P30542 326 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 CLCN6P51797 869 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 PLCL1Q15111 1095 aa12.93□□□□□ -0.34
SMU1-201ENST00000397149 C11orf57Q6ZUT1 292 aaPredicted RBP12.93□□□□□ -0.34
SMU1-201ENST00000397149 KRT73Q86Y46 540 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms