RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 APBA1Q02410 837 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 FAM47EQ6ZV65 393 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 SYT2Q8N9I0 419 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 ABTB1Q969K4 478 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.38■□□□□ 0.532e-6■■■■□ 25.8
MCF2L-208ENST00000397030 ARHGEF12Q9NZN5 1544 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 DARSP14868 501 aaKnown RBP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 ARL6IP4Q66PJ3 421 aaKnown RBP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 EPM2AIP1Q7L775 607 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 C1orf54Q8WWF1 131 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 SLC38A7Q9NVC3 462 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 DDX56Q9NY93 547 aaKnown RBP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 CEP72Q9P209 647 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 TRIM33Q9UPN9 1127 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 CYP26A1O43174 497 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 LARGE1O95461 756 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 HPCAP84074 193 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 ANKS6Q68DC2 871 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.38■□□□□ 0.53
MCF2L-208ENST00000397030 RD3Q7Z3Z2 195 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 TXLNGQ9NUQ3 528 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 DTNAQ9Y4J8 743 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 IPPQ9Y573 584 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 EHD2Q9NZN4 543 aa18.38■□□□□ 0.53
MCF2L-208ENST00000397030 CTIFO43310 598 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 KRT14P02533 472 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 EIF3EP60228 445 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 GLRA4Q5JXX5 417 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 NUP93Q8N1F7 819 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 PHF21AQ96BD5 680 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 COLEC11Q9BWP8 271 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 EML4Q9HC35 981 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 GIMAP4Q9NUV9 329 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 ARHGAP26Q9UNA1 814 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 LMNAP02545 664 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 MYL4P12829 197 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 CCDC15Q0P6D6 951 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 DMC1Q14565 340 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 EMC2Q15006 297 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 GOLGA7BQ2TAP0 167 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 TRIML2Q8N7C3 387 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 TSEN34Q9BSV6 310 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 ANGPTL2Q9UKU9 493 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 PLEKHG2Q9H7P9 1386 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 IMPDH2P12268 514 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 EPHX2P34913 555 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 EPHA10Q5JZY3 1008 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 STRIP1Q5VSL9 837 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 ANKRD13AQ8IZ07 590 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 DEFB129Q9H1M3 183 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 GUCA1CO95843 209 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 CYP4F11Q9HBI6 524 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 RNASEH1O60930 286 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 ZFXP17010 805 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 TYK2P29597 1187 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 ETF1P62495 437 aaKnown RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 CDC42EP1Q00587 391 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 MDM2Q00987 491 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 SEPT1Q8WYJ6 367 aa18.37■□□□□ 0.53
MCF2L-208ENST00000397030 PNMA8BQ9ULN7 279 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-208ENST00000397030 HSP90AA5PQ58FG0 334 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 IRAK1BP1Q5VVH5 260 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 NUGGCQ68CJ6 796 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 RFX8Q6ZV50 586 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 CACUL1Q86Y37 369 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 JADE3Q92613 823 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 PNKPQ96T60 521 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 STARD7Q9NQZ5 370 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 VGLL3A8MV65 326 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 MYO1GB0I1T2 1018 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 DEUP1Q05D60 604 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 E4F1Q66K89 784 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-208ENST00000397030 SLC30A5Q8TAD4 765 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 PLEKHF1Q96S99 279 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 CINPQ9BW66 212 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-208ENST00000397030 DCTN4Q9UJW0 460 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 KIFC3Q9BVG8 833 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 ADAM33Q9BZ11 813 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 PLAAQ9Y263 795 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
MCF2L-208ENST00000397030 MAPK13O15264 365 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 CD4P01730 458 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 SPARCL1Q14515 664 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 ATF7IP2Q5U623 682 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 FAM129AQ9BZQ8 928 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
MCF2L-208ENST00000397030 ARHGEF38Q9NXL2 777 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 BARHL2Q9NY43 387 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 CKBP12277 381 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 LIFRP42702 1097 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 KLHL38Q2WGJ6 581 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 SCFD1Q8WVM8 642 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 OSBPL5Q9H0X9 879 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-208ENST00000397030 BCL2L12Q9HB09 334 aa18.36■□□□□ 0.53
MCF2L-208ENST00000397030 C3orf70A6NLC5 250 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-208ENST00000397030 ERVK-10P10266 1014 aa18.35■□□□□ 0.53
MCF2L-208ENST00000397030 TMED1Q13445 227 aa18.35■□□□□ 0.53
MCF2L-208ENST00000397030 MDH1BQ5I0G3 518 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms