RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 POLR2BP30876 1174 aaKnown RBP16.24■□□□□ 0.19
MCF2L-205ENST00000397017 ATP11AP98196 1134 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 ACVR2BQ13705 512 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 RHOT2Q8IXI1 618 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 OR5B17Q8NGF7 314 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 RIN2Q8WYP3 895 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-205ENST00000397017 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 SNX25Q9H3E2 840 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 C17orf75Q9HAS0 396 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 ALG6Q9Y672 507 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 CAPN9O14815 690 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 NOL4O94818 638 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 KRT1P04264 644 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 AKAP5P24588 427 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 CTNNA1P35221 906 aaKnown RBP16.24■□□□□ 0.19
MCF2L-205ENST00000397017 GTF2BQ00403 316 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 MAPK7Q13164 816 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 EEF1DP3Q658K8 133 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 HSPH1Q92598 858 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 DAAM1Q9Y4D1 1078 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 GOLGA6CA6NDK9 693 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 ADCY3O60266 1144 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 GOLGA6DP0CG33 693 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 CYP11B1P15538 503 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 MEA1Q16626 185 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 TMEM35BQ8NCS4 154 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 GOLGA6AQ9NYA3 693 aa16.24■□□□□ 0.19
MCF2L-205ENST00000397017 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 OGTO15294 1046 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 DAPK3O43293 454 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 TUBBP07437 444 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 COMTP21964 271 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 SLCO1A2P46721 670 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 PPP6R3Q5H9R7 873 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 PCDHA2Q9Y5H9 948 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 UBE4BO95155 1302 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 RGS20O76081 388 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 PSMC1P62191 440 aaKnown RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 PPP2R5DQ14738 602 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 SYCP2LQ5T4T6 812 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 DAB2IPQ5VWQ8 1189 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 RSPH3Q86UC2 560 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 SENP7Q9BQF6 1050 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 GANQ9H2C0 597 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 STIM2Q9P246 746 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 TTC7AQ9ULT0 858 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 PSMA2P25787 234 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 SEMA4DQ92854 862 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 ARHGEF26Q96DR7 871 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 KCNK9Q9NPC2 374 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 DMGDHQ9UI17 866 aaKnown RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 ZNF112Q9UJU3 913 aa16.23■□□□□ 0.19
MCF2L-205ENST00000397017 AJAP1Q9UKB5 411 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-205ENST00000397017 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 OPA1O60313 960 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 RNASELQ05823 741 aaKnown RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 SAMD3Q8N6K7 520 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 C1orf131Q8NDD1 294 aaKnown RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 A8MXQ7 604 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 F5H423 210 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 TRPA1O75762 1119 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 STAG3L1P0CL83 205 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 KRT81Q14533 505 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 GRIK4Q16099 956 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 KIAA0319LQ8IZA0 1049 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 HDAC7Q8WUI4 952 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 TRIM51Q9BSJ1 452 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 RRM1P23921 792 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 RWDD2BP57060 319 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 TMEM132DQ14C87 1099 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 MFSD14CQ5VZR4 134 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 RSPH14Q9UHP6 348 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
MCF2L-205ENST00000397017 MAGED2Q9UNF1 606 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-205ENST00000397017 H0YHG0 523 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 MAGEB2O15479 319 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 RTN2O75298 545 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 GAS8O95995 478 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 PSMC4P43686 418 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 SMTNL2Q2TAL5 461 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms