RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 FAM171A1Q5VUB5 890 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 POTEHQ6S545 545 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 CD300LGQ6UXG3 332 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 RSPO2Q6UXX9 243 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-202ENST00000396828 DTHD1Q6ZMT9 781 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-202ENST00000396828 CEP57Q86XR8 500 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 CCDC105Q8IYK2 499 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 HACE1Q8IYU2 909 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 GPR152Q8TDT2 470 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 HDAC7Q8WUI4 952 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 PRIMPOLQ96LW4 560 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 NACC1Q96RE7 527 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 PLEKHA4Q9H4M7 779 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 PIDD1Q9HB75 910 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 GDAQ9Y2T3 454 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 SRPRBQ9Y5M8 271 aaKnown RBP11.36□□□□□ -0.59
NEDD8-202ENST00000396828 FAM186AA6NE01 2351 aa11.36□□□□□ -0.59
NEDD8-202ENST00000396828 A0A1W2PQ27 194 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 A0A1W2PQ64 194 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 A0A1W2PQD8 194 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 ACKR2O00590 384 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 N4BP3O15049 544 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 TRAK2O60296 914 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 GADD45BO75293 160 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-202ENST00000396828 PRKCBP05771 671 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 THP07101 528 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 HTR4Q13639 388 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 ANGPT1Q15389 498 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 CYP26C1Q6V0L0 522 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 ZBTB8OSQ8IWT0 167 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 CEP120Q8N960 986 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 DTWD2Q8NBA8 298 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 C3orf58Q8NDZ4 430 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 STAMQ92783 540 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 FGF14Q92915 247 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 TTPALQ9BTX7 342 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 IRF2BPLQ9H1B7 796 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 GOLGA2P5Q9HBQ8 144 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■■□□ 15.3
NEDD8-202ENST00000396828 ZDHHC7Q9NXF8 308 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-202ENST00000396828 FBXW11Q9UKB1 542 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 NUMBLQ9Y6R0 609 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 ZMYM2Q9UBW7 1377 aa11.35□□□□□ -0.59
NEDD8-202ENST00000396828 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.594e-7■■■■■ 86.2
NEDD8-202ENST00000396828 ARHGEF35A5YM69 484 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 PP2D1A8MPX8 630 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 ANHXE9PGG2 379 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 I3L4J1 428 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 CCL16O15467 120 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 MEFVO15553 781 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-202ENST00000396828 ABCB7O75027 752 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 LRRN2O75325 713 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 C1RP00736 705 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 SRFP11831 508 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 CMA1P23946 247 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 CLCNKBP51801 687 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-202ENST00000396828 PSMD5Q16401 504 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 IL17AQ16552 155 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 MAPK6Q16659 721 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 PARM1Q6UWI2 310 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 CCDC73Q6ZRK6 1079 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 GPR65Q8IYL9 337 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 DAW1Q8N136 415 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 TMEM130Q8N3G9 435 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
NEDD8-202ENST00000396828 RAB34Q9BZG1 259 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 C2orf40Q9H1Z8 148 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 HCFC1R1Q9NWW0 138 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 FAM13BQ9NYF5 915 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 DPP7Q9UHL4 492 aa11.34□□□□□ -0.59
NEDD8-202ENST00000396828 EP300Q09472 2414 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-202ENST00000396828 E9PMD0 336 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 STK25O00506 426 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 C8AP07357 584 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 DCNP07585 359 aaKnown RBP11.33□□□□□ -0.6
NEDD8-202ENST00000396828 GLULP15104 373 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 FSHRP23945 695 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 CDC25AP30304 524 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 OR1D2P34982 312 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.6
NEDD8-202ENST00000396828 TXLNAP40222 546 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
NEDD8-202ENST00000396828 NAMPTP43490 491 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 AXDND1Q5T1B0 1012 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-202ENST00000396828 TAS1R3Q7RTX0 852 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 DEPTORQ8TB45 409 aa11.33□□□□□ -0.6
NEDD8-202ENST00000396828 ITFG1Q8TB96 612 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms