RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SPIRE1Q08AE8 756 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 GAS6Q14393 721 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-202ENST00000396629 KCNB2Q92953 911 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 IRF7Q92985 503 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 DYDC2Q96IM9 177 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 TRMT61BQ9BVS5 477 aaKnown RBP9.35□□□□□ -0.91
SCFD1-202ENST00000396629 SLKQ9H2G2 1235 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-202ENST00000396629 ZSWIM4Q9H7M6 989 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-202ENST00000396629 BACE2Q9Y5Z0 518 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
SCFD1-202ENST00000396629 CHURC1-FNTBB4DL54 471 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 TMEM189-UBE2V1I3L0A0 370 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 NRG2O14511 850 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 TBX3O15119 743 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 GLRA2P23416 452 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 FNTBP49356 437 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 MLLT6P55198 1093 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 DMWDQ09019 674 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 GRM2Q14416 872 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 INF2Q27J81 1249 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 FAM78AQ5JUQ0 283 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 PPP4R3AQ6IN85 833 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 GALNT17Q6IS24 598 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 KRT25Q7Z3Z0 450 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 LONP2Q86WA8 852 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 SPEM1Q8N4L4 309 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 HAS1Q92839 578 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 K7ESF4 209 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 LYPLA2O95372 231 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 PROS1P07225 676 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 EVCP57679 992 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 SRSF5Q13243 272 aaKnown RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 PTGDRQ13258 359 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 COL9A2Q14055 689 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 CTTNQ14247 550 aaKnown RBP9.34□□□□□ -0.91
SCFD1-202ENST00000396629 IL31Q6EBC2 164 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 CD300LGQ6UXG3 332 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 ASB16Q96NS5 453 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 CXCL16Q9H2A7 254 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 ANKEF1Q9NU02 776 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
SCFD1-202ENST00000396629 WDR27A2RRH5 827 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 ZNF197O14709 1029 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 DGAT1O75907 488 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 ABLIM3O94929 683 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 SLITRK3O94933 977 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 GCFC2P16383 781 aaKnown RBP9.33□□□□□ -0.92
SCFD1-202ENST00000396629 PSMC3P17980 439 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 PDIA3P30101 505 aaKnown RBP9.33□□□□□ -0.92
SCFD1-202ENST00000396629 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 VITQ6UXI7 678 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-202ENST00000396629 DEPDC1BQ8WUY9 529 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 TCEAL4Q96EI5 215 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
SCFD1-202ENST00000396629 PRIMPOLQ96LW4 560 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 NCOA5Q9HCD5 579 aaKnown RBP9.33□□□□□ -0.92
SCFD1-202ENST00000396629 SNTG2Q9NY99 539 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 PIAS3Q9Y6X2 628 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 SPAG17Q6Q759 2223 aa9.33□□□□□ -0.92
SCFD1-202ENST00000396629 RECQL4O94761 1208 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 DEXIO95424 95 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 LRG1P02750 347 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 IGFBP6P24592 240 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 GDI1P31150 447 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 HOXA6P31267 233 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CCR2P41597 374 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CCT2P78371 535 aaKnown RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 SSRP1Q08945 709 aaKnown RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 NCAPH2Q6IBW4 605 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 BLOC1S2Q6QNY1 142 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 ANKS3Q6ZW76 656 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 WDR5BQ86VZ2 330 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 TRIM22Q8IYM9 498 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 ZNF461Q8TAF7 563 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 MSANTD3Q96H12 275 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CORO1BQ9BR76 489 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 FZD8Q9H461 694 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 TRPV4Q9HBA0 871 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 PRMT7Q9NVM4 692 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CNOT1A5YKK6 2376 aaKnown RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 FAM208BQ5VWN6 2430 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 ARNTLO00327 626 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 N4BP3O15049 544 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 MOSPD3O75425 235 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 ZNF806P0C7X5 589 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 RPS6KB1P23443 525 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CCNE1P24864 410 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 TKTP29401 623 aaKnown RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 ROR1Q01973 937 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CYP4A11Q02928 519 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 LRRC32Q14392 662 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 AASDHQ4L235 1098 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 SLC8B1Q6J4K2 584 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms