RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CCDC175P0C221 793 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 ASIC2Q16515 512 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 NOTUMQ6P988 496 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-204ENST00000396548 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 CXCL16Q9H2A7 254 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
TRIM39-204ENST00000396548 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 CCP110O43303 1012 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 STAT1P42224 750 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 OSTNP61366 133 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 GCNT1Q02742 428 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 PTK2Q05397 1052 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 TRAPPC11Q7Z392 1133 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 FAM71AQ8IYT1 594 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 SHC3Q92529 594 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 PI4K2AQ9BTU6 479 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 ASB7Q9H672 318 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
TRIM39-204ENST00000396548 RPF1Q9H9Y2 349 aaKnown RBP13.73□□□□□ -0.21
TRIM39-204ENST00000396548 NPTXRO95502 500 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 ABL1P00519 1130 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 CDK7P50613 346 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 KIF11P52732 1056 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 SLC9C1Q4G0N8 1177 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 UBR7Q8N806 425 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 SPAG5Q96R06 1193 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 MTMR12Q9C0I1 747 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 EVI5O60447 810 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 XKR4Q5GH76 650 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 SLC30A5Q8TAD4 765 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 SIX4Q9UIU6 781 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 OGDHLQ9ULD0 1010 aa13.72□□□□□ -0.21
TRIM39-204ENST00000396548 BZW2Q9Y6E2 419 aaKnown RBP13.72□□□□□ -0.21
TRIM39-204ENST00000396548 RCCD1A6NED2 376 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 FANCGO15287 622 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 NFICP08651 508 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 FERP16591 822 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ZBTB6Q15916 424 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 JADE1Q6IE81 842 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ARRDC4Q8NCT1 418 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 DNM1LO00429 736 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ASS1P00966 412 aaKnown RBP13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ANXA13P27216 316 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 CYLC1P35663 651 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-204ENST00000396548 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-204ENST00000396548 MTFR1Q15390 333 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 RSPH3Q86UC2 560 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 TMEM130Q8N3G9 435 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.21
TRIM39-204ENST00000396548 SNX27Q96L92 541 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 CCDC42Q96M95 316 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 NT5C1BQ96P26 610 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ACAP3Q96P50 834 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
TRIM39-204ENST00000396548 CAND2O75155 1236 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 GFPT2O94808 682 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 PIK3CAP42336 1068 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 MFAP3P55082 362 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 NCOA4Q13772 614 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 JAKMIP2Q96AA8 810 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 GLT1D1Q96MS3 346 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 NUB1Q9Y5A7 615 aa13.71□□□□□ -0.22
TRIM39-204ENST00000396548 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 OFD1O75665 1012 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 SLC18A3Q16572 532 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 SPOPLQ6IQ16 392 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 C1orf127Q8N9H9 656 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 ERVK-5Q9HDB9 667 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 CNTN3Q9P232 1028 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 DERAQ9Y315 318 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 C2CD2Q9Y426 696 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 UMODL1Q5DID0 1318 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 GOLGA6L9A6NEM1 432 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 GFPT1Q06210 699 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 NCBP1Q09161 790 aaKnown RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 ARHGAP44Q17R89 818 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 NT5DC4Q86YG4 428 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 CD302Q8IX05 232 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 ARID3AQ99856 593 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 AGO3Q9H9G7 860 aaKnown RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
TRIM39-204ENST00000396548 ST3GAL5Q9UNP4 418 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms