RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 NUP85Q9BW27 656 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 CNOT8Q9UFF9 292 aaKnown RBP17.3■□□□□ 0.36
SNX6-202ENST00000396526 TMEM59LQ9UK28 342 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 DOCK5Q9H7D0 1870 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 IGKV6-21A0A0C4DH24 114 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 SART1O43290 800 aaKnown RBP17.3■□□□□ 0.36
SNX6-202ENST00000396526 OPA1O60313 960 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 CUL1Q13616 776 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 CDCA2Q69YH5 1023 aaPredicted RBP17.3■□□□□ 0.36
SNX6-202ENST00000396526 CRELD2Q6UXH1 353 aaPredicted RBP17.3■□□□□ 0.36
SNX6-202ENST00000396526 EIF1ADQ8N9N8 165 aaKnown RBP17.3■□□□□ 0.36
SNX6-202ENST00000396526 OLIG1Q8TAK6 271 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 WHAMMQ8TF30 809 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 FGD4Q96M96 766 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 GDAP1L1Q96MZ0 367 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 AP1M1Q9BXS5 423 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 SLC5A4Q9NY91 659 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 A0A0G2JMZ2 1700 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 WDR81Q562E7 1941 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 ACKR2O00590 384 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 PHKA2P46019 1235 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 C2orf69Q8N8R5 385 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
SNX6-202ENST00000396526 ACO2Q99798 780 aaKnown RBP17.29■□□□□ 0.36
SNX6-202ENST00000396526 GDF3Q9NR23 364 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 HPCAL4Q9UM19 191 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 CCDC66A2RUB6 948 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 MSCO60682 206 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 TNNC2P02585 160 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 CYP1A2P05177 515 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 NOP14P78316 857 aaKnown RBP17.29■□□□□ 0.36
SNX6-202ENST00000396526 MRPS25P82663 173 aaKnown RBP17.29■□□□□ 0.36
SNX6-202ENST00000396526 CLEC16AQ2KHT3 1053 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 ST7Q9NRC1 585 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 MTUS1Q9ULD2 1270 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 UTP11Q9Y3A2 253 aaKnown RBP17.29■□□□□ 0.36
SNX6-202ENST00000396526 ARID2Q68CP9 1835 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 ADORA2AP29274 412 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 YWHAEP62258 255 aaKnown RBP17.29■□□□□ 0.36
SNX6-202ENST00000396526 ALS2CLQ60I27 953 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 VPS18Q9P253 973 aa17.29■□□□□ 0.36
SNX6-202ENST00000396526 ERLIN2O94905 339 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 DRP2Q13474 957 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 MPZL3Q6UWV2 235 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 GSPT2Q8IYD1 628 aaKnown RBP17.28■□□□□ 0.36
SNX6-202ENST00000396526 COPS5Q92905 334 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 CAVIN3Q969G5 261 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 RAB17Q9H0T7 212 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 PRMT7Q9NVM4 692 aaPredicted RBP17.28■□□□□ 0.36
SNX6-202ENST00000396526 ADGRA2Q96PE1 1338 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 RAD51CO43502 376 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 GLI1P08151 1106 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 CLTAP09496 248 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 GJA5P36382 358 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 SGSM1Q2NKQ1 1148 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 ATF7IP2Q5U623 682 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 TMEM270Q6UE05 265 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 ANKRD36BP1Q96IX9 119 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 COG5Q9UP83 839 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNX6-202ENST00000396526 AARSP49588 968 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNX6-202ENST00000396526 MCL1Q07820 350 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 SMYD5Q6GMV2 418 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 ZNF467Q7Z7K2 595 aaPredicted RBP17.28■□□□□ 0.36
SNX6-202ENST00000396526 ANKRD23Q86SG2 305 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 PARK7Q99497 189 aaKnown RBP17.28■□□□□ 0.36
SNX6-202ENST00000396526 R3HDMLQ9H3Y0 253 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 ACP6Q9NPH0 428 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 RASAL2Q9UJF2 1139 aa17.28■□□□□ 0.36
SNX6-202ENST00000396526 MYBL2P10244 700 aa17.27■□□□□ 0.36
SNX6-202ENST00000396526 MAPK4P31152 587 aa17.27■□□□□ 0.36
SNX6-202ENST00000396526 IGBP1P78318 339 aa17.27■□□□□ 0.36
SNX6-202ENST00000396526 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
SNX6-202ENST00000396526 MRPL47Q9HD33 250 aaKnown RBP17.27■□□□□ 0.36
SNX6-202ENST00000396526 AVENQ9NQS1 362 aaPredicted RBP17.27■□□□□ 0.36
SNX6-202ENST00000396526 NFU1Q9UMS0 254 aa17.27■□□□□ 0.36
SNX6-202ENST00000396526 OTOFQ9HC10 1997 aa17.27■□□□□ 0.36
SNX6-202ENST00000396526 MYO1FO00160 1098 aa17.27■□□□□ 0.35
SNX6-202ENST00000396526 DDX3YO15523 660 aaKnown RBP17.27■□□□□ 0.35
SNX6-202ENST00000396526 COMTP21964 271 aa17.27■□□□□ 0.35
SNX6-202ENST00000396526 GNA15P30679 374 aa17.27■□□□□ 0.35
SNX6-202ENST00000396526 TNFAIP2Q03169 654 aa17.27■□□□□ 0.35
SNX6-202ENST00000396526 ZSWIM1Q9BR11 485 aa17.27■□□□□ 0.35
SNX6-202ENST00000396526 DDX47Q9H0S4 455 aaKnown RBP17.27■□□□□ 0.35
SNX6-202ENST00000396526 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.35
SNX6-202ENST00000396526 GBA2Q9HCG7 927 aaPredicted RBP17.27■□□□□ 0.35
SNX6-202ENST00000396526 ZCCHC17Q9NP64 241 aaKnown RBP17.27■□□□□ 0.35
SNX6-202ENST00000396526 FAM170AA1A519 330 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 PTENP60484 403 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 POU5F1BQ06416 359 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 ZNF792Q3KQV3 632 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 THNSL1Q8IYQ7 743 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 DDX1Q92499 740 aaKnown RBP17.26■□□□□ 0.35
SNX6-202ENST00000396526 LRRC45Q96CN5 670 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 SCLT1Q96NL6 688 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 HAPLN2Q9GZV7 340 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms