RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 NBPF20Q3BBV1 942 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 TRAPPC11Q7Z392 1133 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 THNSL1Q8IYQ7 743 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 PCSK9Q8NBP7 692 aaKnown RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 MYRIPQ8NFW9 859 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 DNAJB3Q8WWF6 145 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 TAF4BQ92750 862 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 TATDN2Q93075 761 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 PGK1P00558 417 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 HARSP12081 509 aaKnown RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 ELNP15502 786 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 TBXAS1P24557 533 aaPredicted RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 PTPN11Q06124 597 aaPredicted RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 NCOA4Q13772 614 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 SNX17Q15036 470 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 SGSM1Q2NKQ1 1148 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 SEZ6Q53EL9 994 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 ALKBH5Q6P6C2 394 aaKnown RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 PPM1KQ8N3J5 372 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 SCLT1Q96NL6 688 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 TSPAN18Q96SJ8 248 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 ADPGKQ9BRR6 497 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 FAM49AQ9H0Q0 323 aaPredicted RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 C1orf112Q9NSG2 853 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 DDX20Q9UHI6 824 aaKnown RBP12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 GUCA1BQ9UMX6 200 aa12.81□□□□□ -0.36
GTF2A2-202ENST00000396060 MEFVO15553 781 aaPredicted RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 CSDE1O75534 798 aaKnown RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 GZMAP12544 262 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 ANK1P16157 1881 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 ACO1P21399 889 aaKnown RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 PIK3CAP42336 1068 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 BPIFB4P59827 614 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 ZNF200P98182 395 aaPredicted RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 BIRC3Q13489 604 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 KCNA10Q16322 511 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 SLC10A6Q3KNW5 377 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 NOTUMQ6P988 496 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 SLC27A1Q6PCB7 646 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 SERINC5Q86VE9 423 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 UBR7Q8N806 425 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 CEP120Q8N960 986 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 KAT5Q92993 513 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 AGPAT1Q99943 283 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 TSEN34Q9BSV6 310 aaKnown RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 NOCTQ9UK39 431 aaKnown RBP12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 DERAQ9Y315 318 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
GTF2A2-202ENST00000396060 A0A0A6YYK5 440 aaPredicted RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 LACTBL1A8MY62 500 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 TNNC2P02585 160 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 ASGR1P07306 291 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 TNFAIP3P21580 790 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 CUL2Q13617 745 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 TCEAL1Q15170 157 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 LMBRD2Q68DH5 695 aaPredicted RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 ZNF677Q86XU0 584 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 SLC35F6Q8N357 371 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 TRIM58Q8NG06 486 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 CPB2Q96IY4 423 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 ACAP3Q96P50 834 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 VRTNQ9H8Y1 702 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
GTF2A2-202ENST00000396060 ANO9A1A5B4 782 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 CTAGE9A4FU28 777 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 PHACTR2O75167 634 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 STAU1O95793 577 aaKnown RBP12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 CST3P01034 146 aaPredicted RBP12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 CXCL8P10145 99 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 CHRNB2P17787 502 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 MRPS6P82932 125 aaKnown RBP12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 ALKAL1Q6UXT8 129 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
GTF2A2-202ENST00000396060 RNF180Q86T96 592 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms