RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
ITGB1-202ENST00000396033 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
ITGB1-202ENST00000396033 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
ITGB1-202ENST00000396033 AFG1LQ8WV93 481 aa13.04□□□□□ -0.32
ITGB1-202ENST00000396033 HES6Q96HZ4 224 aa13.04□□□□□ -0.32
ITGB1-202ENST00000396033 RRAGCQ9HB90 399 aa13.04□□□□□ -0.32
ITGB1-202ENST00000396033 MAP2K7O14733 419 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 C22orf31O95567 290 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 RUBCNQ92622 972 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 OGTO15294 1046 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ATMINO43313 823 aaPredicted RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 FAM189A1O60320 539 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 CALCAP01258 141 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 INSRRP14616 1297 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 MCL1Q07820 350 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 GRB14Q14449 540 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 STIM2Q9P246 746 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 RBM47A0AV96 593 aaKnown RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 PGRMC1O00264 195 aaKnown RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 CUL2Q13617 745 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 KRT12Q99456 494 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
ITGB1-202ENST00000396033 APOBEC3GQ9HC16 384 aaKnown RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 CHORDC1Q9UHD1 332 aaPredicted RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
ITGB1-202ENST00000396033 ACKR2O00590 384 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 SNAI1O95863 264 aaPredicted RBP13.02□□□□□ -0.32
ITGB1-202ENST00000396033 HADHBP55084 474 aaKnown RBP13.02□□□□□ -0.32
ITGB1-202ENST00000396033 TNNC1P63316 161 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 NOP14P78316 857 aaKnown RBP13.02□□□□□ -0.32
ITGB1-202ENST00000396033 NCOA4Q13772 614 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 CASP8Q14790 479 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 GLE1Q53GS7 698 aaKnown RBP13.02□□□□□ -0.32
ITGB1-202ENST00000396033 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 WDR49Q8IV35 697 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 CALR3Q96L12 384 aaKnown RBP13.02□□□□□ -0.32
ITGB1-202ENST00000396033 PTPN18Q99952 460 aa13.02□□□□□ -0.32
ITGB1-202ENST00000396033 ASAP2O43150 1006 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 B4GALT5O43286 388 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 MYBL2P10244 700 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 CCNI2Q6ZMN8 369 aaPredicted RBP13.02□□□□□ -0.33
ITGB1-202ENST00000396033 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
ITGB1-202ENST00000396033 MAML3Q96JK9 1138 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
ITGB1-202ENST00000396033 IMPG2Q9BZV3 1241 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 ABLIM1O14639 778 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
ITGB1-202ENST00000396033 CLTAP09496 248 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 AP3M2P53677 418 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 PTENP60484 403 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 SMC1AQ14683 1233 aaKnown RBP13.02□□□□□ -0.33
ITGB1-202ENST00000396033 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 TSHZ1Q6ZSZ6 1077 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 PPP1R16BQ96T49 567 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 FZD8Q9H461 694 aa13.02□□□□□ -0.33
ITGB1-202ENST00000396033 BPIFB4P59827 614 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 GRM1Q13255 1194 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 TCEAL1Q15170 157 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 CLEC16AQ2KHT3 1053 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 FOXR1Q6PIV2 292 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 CPSF3Q9UKF6 684 aaKnown RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 PCDHB2Q9Y5E7 798 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 DDX3YO15523 660 aaKnown RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 MAPK4P31152 587 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 PHKA2P46019 1235 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 KLHL7Q8IXQ5 586 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 NUP85Q9BW27 656 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 MINDY3Q9H8M7 445 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 GTF3C4Q9UKN8 822 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 AKT3Q9Y243 479 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 NUB1Q9Y5A7 615 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 H3BQF6 201 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
ITGB1-202ENST00000396033 PROZP22891 400 aa13.01□□□□□ -0.33
ITGB1-202ENST00000396033 OSTNP61366 133 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms