RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 KRT40Q6A162 431 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 ALG1LQ6GMV1 187 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 MIER3Q7Z3K6 550 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 VN1R5Q7Z5H4 357 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 ZNF410Q86VK4 478 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 FAM228AQ86W67 206 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 CKAP2LQ8IYA6 745 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 EXOC8Q8IYI6 725 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 NSUN7Q8NE18 718 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 NEK9Q8TD19 979 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 PPM1EQ8WY54 764 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 ZBTB10Q96DT7 871 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 PABPC5Q96DU9 382 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 AIFM3Q96NN9 605 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 UHRF1Q96T88 793 aaPredicted RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 JPH2Q9BR39 696 aaPredicted RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 ADAMTS10Q9H324 1103 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 UBE2ZQ9H832 354 aaPredicted RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM161AQ9NX61 479 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 ORC3Q9UBD5 711 aaPredicted RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 DDX25Q9UHL0 483 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 VAV3Q9UKW4 847 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 MTUS1Q9ULD2 1270 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 NOC2LQ9Y3T9 749 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 SAMM50Q9Y512 469 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 SPTBN5Q9NRC6 3674 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 PRRC2BQ5JSZ5 2229 aaKnown RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 LOXHD1Q8IVV2 1947 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 FNDC1Q4ZHG4 1894 aaPredicted RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 ARID2Q68CP9 1835 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 H3BRJ5 948 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 SLC37A4O43826 429 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 MGEA5O60502 916 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 MAFO75444 373 aaPredicted RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 DARSP14868 501 aaKnown RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 CTNNB1P35222 781 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 KRT2P35908 639 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 QARSP47897 775 aaKnown RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 CLCN3P51790 818 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 NLRP11P59045 1033 aaKnown RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 PSMC5P62195 406 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 TFF2Q03403 129 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM62Q0P6H9 643 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 ORC2Q13416 577 aaPredicted RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 ME3Q16798 604 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 KIZQ2M2Z5 673 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 LETM2Q2VYF4 491 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 EFCAB12Q6NXP0 572 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 C4orf19Q8IY42 314 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 SLFN12Q8IYM2 578 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM151AQ8N4L1 468 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 ADAM2Q99965 735 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 DHX33Q9H6R0 707 aaKnown RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 BRMS1Q9HCU9 246 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 ABCB6Q9NP58 842 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 CHST12Q9NRB3 414 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 ST3GAL5Q9UNP4 418 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 KCNJ14Q9UNX9 436 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 LZTS1Q9Y250 596 aa6.86□□□□□ -1.31
PTPN20-208ENST00000395727 MRPL42Q9Y6G3 142 aaKnown RBP6.86□□□□□ -1.31
PTPN20-208ENST00000395727 A0A096LPE4 126 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 A0A0U1RQF3 1178 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 A0A1W2PPZ6 126 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 DENND3A2RUS2 1198 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 LINC01387J3KSC0 135 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 CHMP2AO43633 222 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 GADD45BO75293 160 aaPredicted RBP6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PRPF40AO75400 957 aaKnown RBP6.85□□□□□ -1.31
PTPN20-208ENST00000395727 LYPLA2O95372 231 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 LARGE1O95461 756 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 VTNP04004 478 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 ITPKAP23677 461 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 DNM2P50570 870 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 KCNQ1P51787 676 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 NEK4P51957 841 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 CAMK1Q14012 370 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PCBP1Q15365 356 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPN20-208ENST00000395727 EPHA7Q15375 998 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM266Q2M3C6 531 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 TXNDC11Q6PKC3 985 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PIK3AP1Q6ZUJ8 805 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 ANO5Q75V66 913 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 METTL13Q8N6R0 699 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 ASAP3Q8TDY4 903 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 HAS1Q92839 578 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PPP2R3CQ969Q6 453 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 LLPHQ9BRT6 129 aaKnown RBP6.85□□□□□ -1.31
PTPN20-208ENST00000395727 INO80BQ9C086 356 aaPredicted RBP6.85□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM117Q9H0C3 514 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 CYP26B1Q9NR63 512 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 DACT1Q9NYF0 836 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PRKAG3Q9UGI9 489 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PLAGL2Q9UPG8 496 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms