RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 DERAQ9Y315 318 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 NFICP08651 508 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 PLEKHG4Q58EX7 1191 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 JADE1Q6IE81 842 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 CNGA4Q8IV77 575 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
PTPN20-206ENST00000395722 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 TSPAN18Q96SJ8 248 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 NAA15Q9BXJ9 866 aaKnown RBP16.34■□□□□ 0.21
PTPN20-206ENST00000395722 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
PTPN20-206ENST00000395722 RAB20Q9NX57 234 aa16.34■□□□□ 0.21
PTPN20-206ENST00000395722 PDCD11Q14690 1871 aaKnown RBP16.34■□□□□ 0.21
PTPN20-206ENST00000395722 LRRN2O75325 713 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 CXCL10P02778 98 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 TPM1P09493 284 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 UCHL3P15374 230 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 FECHP22830 423 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 YARSP54577 528 aaKnown RBP16.33■□□□□ 0.21
PTPN20-206ENST00000395722 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.21
PTPN20-206ENST00000395722 ZBED6P86452 979 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 GOLGA8FQ08AF8 430 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 GOLGA8DPQ0D2H9 430 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 ZBTB6Q15916 424 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 LRRC8AQ8IWT6 810 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 PANX2Q96RD6 677 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 DNAJC7Q99615 494 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 ADAM2Q99965 735 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 RGS18Q9NS28 235 aa16.33■□□□□ 0.21
PTPN20-206ENST00000395722 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.21
PTPN20-206ENST00000395722 A0A0U1RQF3 1178 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 ZC3H11AO75152 810 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTPN20-206ENST00000395722 HLA-DRAP01903 254 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 CLTBP09497 229 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 KCNE1P15382 129 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
PTPN20-206ENST00000395722 CXorf38Q8TB03 319 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 CPLX3Q8WVH0 158 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 LINC01599Q8WXQ3 324 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 FTHL17Q9BXU8 183 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 CXCL16Q9H2A7 254 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 KCNF1Q9H3M0 494 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
PTPN20-206ENST00000395722 TRIP11Q15643 1979 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 TMEM191BP0C7N4 346 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 ATF7P17544 494 aaPredicted RBP16.32■□□□□ 0.2
PTPN20-206ENST00000395722 EN2P19622 333 aaPredicted RBP16.32■□□□□ 0.2
PTPN20-206ENST00000395722 RFX1P22670 979 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 AKAP5P24588 427 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 KRT9P35527 623 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 POLR2FP61218 127 aaKnown RBP16.32■□□□□ 0.2
PTPN20-206ENST00000395722 FAM189BP81408 668 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
PTPN20-206ENST00000395722 TMEM132DQ14C87 1099 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 HACE1Q8IYU2 909 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 ANKRD36BP1Q96IX9 119 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 ZMAT2Q96NC0 199 aaKnown RBP16.32■□□□□ 0.2
PTPN20-206ENST00000395722 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
PTPN20-206ENST00000395722 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
PTPN20-206ENST00000395722 C9IYK1 514 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 KIAA0355O15063 1070 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 TNNC2P02585 160 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 SKIP12755 728 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
PTPN20-206ENST00000395722 BIRC3Q13489 604 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 ZNF598Q86UK7 904 aaKnown RBP16.31■□□□□ 0.2
PTPN20-206ENST00000395722 APOL6Q9BWW8 343 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 ABHD10Q9NUJ1 306 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-206ENST00000395722 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 ITGA4P13612 1032 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 CYP2C18P33260 490 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 JAM2P57087 298 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 NCOA4Q13772 614 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 SCARA3Q6AZY7 606 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 PDXDC1Q6P996 788 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 AGMOQ6ZNB7 445 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 ECHDC2Q86YB7 292 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 TMEM139Q8IV31 216 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 OR8K1Q8NGG5 319 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 APBB2Q92870 758 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 PARP2Q9UGN5 583 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 SIX4Q9UIU6 781 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 GIT1Q9Y2X7 761 aa16.31■□□□□ 0.2
PTPN20-206ENST00000395722 TET1Q8NFU7 2136 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 ASS1P00966 412 aaKnown RBP16.3■□□□□ 0.2
PTPN20-206ENST00000395722 CCZ1BP86790 482 aa16.3■□□□□ 0.2
PTPN20-206ENST00000395722 CCZ1P86791 482 aaPredicted RBP16.3■□□□□ 0.2
PTPN20-206ENST00000395722 LRMPQ12912 555 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 301.5 ms