RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 SHC3Q92529 594 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 KIFAP3Q92845 792 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 RIT2Q99578 217 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 IGF2BP3O00425 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 IFNB1P01574 187 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 PLCB3Q01970 1234 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 NFIL3Q16649 462 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 KLHL29Q96CT2 875 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 RMDN3Q96TC7 470 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 GABBR1Q9UBS5 961 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
ATP2A1-202ENST00000395503 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SNX3O60493 162 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 GLIS1Q8NBF1 620 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 STMN4Q9H169 189 aaPredicted RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 UBE4BO95155 1302 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 GAS8O95995 478 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 CYP1A2P05177 515 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 TCF4P15884 667 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 CAP2P40123 477 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 TAS2R40P59535 323 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 XRCC4Q13426 336 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 NEDD9Q14511 834 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 TMEM270Q6UE05 265 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 ANKS1BQ7Z6G8 1248 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 C4orf33Q8N1A6 199 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 PSPC1Q8WXF1 523 aaKnown RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 RMDN2Q96LZ7 410 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 RUNDC3BQ96NL0 473 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 KCND2Q9NZV8 630 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 NAALADL1Q9UQQ1 740 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 USP15Q9Y4E8 981 aaPredicted RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 TP73O15350 636 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 ASAP2O43150 1006 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 BANF1O75531 89 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 GZMAP12544 262 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 WNT7BP56706 349 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SYCP2LQ5T4T6 812 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 IZUMO3Q5VZ72 239 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 KRT27Q7Z3Y8 459 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 SNF8Q96H20 258 aa12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
ATP2A1-202ENST00000395503 RFX1P22670 979 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 DYNLT1P63172 113 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 GTF2BQ00403 316 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SLC39A4Q6P5W5 647 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 ANO5Q75V66 913 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 TMEM161BQ8NDZ6 487 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SYTL5Q8TDW5 730 aaPredicted RBP12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 ZBTB45Q96K62 511 aaPredicted RBP12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 C1orf112Q9NSG2 853 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 MROH7Q68CQ1 1323 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 ADGRA3Q8IWK6 1321 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 RASA4BC9J798 803 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 RASA4O43374 803 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 TTC4O95801 387 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 P3H1Q32P28 736 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 MTERF2Q49AM1 385 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 PREPLQ4J6C6 727 aaPredicted RBP12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SLC17A8Q8NDX2 589 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 FNBP1Q96RU3 617 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SAYSD1Q9NPB0 183 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 NKIRAS1Q9NYS0 192 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 ZNF148Q9UQR1 794 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
ATP2A1-202ENST00000395503 SKAP2O75563 359 aaPredicted RBP12.34□□□□□ -0.43
ATP2A1-202ENST00000395503 SUN1O94901 812 aa12.34□□□□□ -0.43
ATP2A1-202ENST00000395503 RNASELQ05823 741 aaKnown RBP12.34□□□□□ -0.43
ATP2A1-202ENST00000395503 TRAF1Q13077 416 aa12.34□□□□□ -0.43
ATP2A1-202ENST00000395503 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms