RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 APOBEC3GQ9HC16 384 aaKnown RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 C1orf112Q9NSG2 853 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 CNTNAP2Q9UHC6 1331 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 ZBTB42B2RXF5 422 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 UNGP13051 313 aaPredicted RBP14.96□□□□□ -0.01
SNCA-204ENST00000394989 CUL1Q13616 776 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 TMEM63BQ5T3F8 832 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 ACAD10Q6JQN1 1059 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 ENOSF1Q7L5Y1 443 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 PRPF31Q8WWY3 499 aaKnown RBP14.96□□□□□ -0.01
SNCA-204ENST00000394989 SEPT1Q8WYJ6 367 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 ZNF653Q96CK0 615 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 RPS6KC1Q96S38 1066 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 MSTO1Q9BUK6 570 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 DAPK3O43293 454 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 ADCY3O60266 1144 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 ACO1P21399 889 aaKnown RBP14.96□□□□□ -0.01
SNCA-204ENST00000394989 CLEC16AQ2KHT3 1053 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 TMEM134Q9H6X4 195 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 NRBP2Q9NSY0 501 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 AGTPBP1Q9UPW5 1226 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 KCNH4Q9UQ05 1017 aa14.96□□□□□ -0.01
SNCA-204ENST00000394989 MCM3APO60318 1980 aa14.96□□□□□ -0.02
SNCA-204ENST00000394989 MIF4GDA9UHW6 222 aaKnown RBP14.95□□□□□ -0.02
SNCA-204ENST00000394989 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
SNCA-204ENST00000394989 FAM189A1O60320 539 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 HSF2BPO75031 334 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 MARK3P27448 753 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 FLT3P36888 993 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 HLTFQ14527 1009 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNCA-204ENST00000394989 ANKRD13AQ8IZ07 590 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 OR5B17Q8NGF7 314 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 GPR20Q99678 358 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 GOLGA6CA6NDK9 693 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 CXCL11O14625 94 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 GOLGA6DP0CG33 693 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 SCP2P22307 547 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 HSPA9P38646 679 aaKnown RBP14.95□□□□□ -0.02
SNCA-204ENST00000394989 PIK3CAP42336 1068 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 SLFN12LQ6IEE8 588 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNCA-204ENST00000394989 CDCA5Q96FF9 252 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 TRIM51Q9BSJ1 452 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 GOLGA6AQ9NYA3 693 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 DNAJC25-GNG10A0A024R161 153 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 MSCO60682 206 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 CLSTN1O94985 981 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 CFHP08603 1231 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 BIRC3Q13489 604 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 FAM160B1Q5W0V3 765 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 MAATS1Q7Z4T9 603 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 PPM1EQ8WY54 764 aa14.95□□□□□ -0.02
SNCA-204ENST00000394989 UMODL1Q5DID0 1318 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 PYGMP11217 842 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 TNFSF9P41273 254 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 UBL4BQ8N7F7 174 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 CCDC26Q8TAB7 109 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 ATP8B4Q8TF62 1192 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 CCDC113Q9H0I3 377 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
SNCA-204ENST00000394989 UAP1Q16222 522 aaPredicted RBP14.94□□□□□ -0.02
SNCA-204ENST00000394989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNCA-204ENST00000394989 GLG1Q92896 1179 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 TRIM7Q9C029 511 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 UVRAGQ9P2Y5 699 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 CNOT8Q9UFF9 292 aaKnown RBP14.94□□□□□ -0.02
SNCA-204ENST00000394989 PCDHB2Q9Y5E7 798 aa14.94□□□□□ -0.02
SNCA-204ENST00000394989 TCRBV7S2A1N4TA0A589 114 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 GOLGA8KD6RF30 607 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 LDHAP00338 332 aaKnown RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 HARSP12081 509 aaKnown RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 C2CD6Q53TS8 623 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 WDR44Q5JSH3 913 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 CELF3Q5SZQ8 465 aaKnown RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 CFAP58Q5T655 872 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 LLGL2Q6P1M3 1020 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 PRELID2Q8N945 189 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 CGRRF1Q99675 332 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 WNT8AQ9H1J5 351 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 OPA1O60313 960 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 LGR5O75473 907 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 SLC25A27O95847 323 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 CORO7P57737 925 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 CUL2Q13617 745 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 GPAT2Q6NUI2 795 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 FBXO16Q8IX29 292 aaPredicted RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 LRRC71Q8N4P6 559 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 FAM76AQ8TAV0 307 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 OPTNQ96CV9 577 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 FAM212AQ96EL1 285 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 MYCBPQ99417 103 aaPredicted RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 NAP1L3Q99457 506 aaPredicted RBP14.93□□□□□ -0.02
SNCA-204ENST00000394989 NUB1Q9Y5A7 615 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 PCDHA3Q9Y5H8 950 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 YBX3P16989 372 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNCA-204ENST00000394989 HSD17B3P37058 310 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 DR1Q01658 176 aa14.93□□□□□ -0.02
SNCA-204ENST00000394989 PPIL2Q13356 520 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms