RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 NAMPTP43490 491 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 PUM1Q14671 1186 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRAF4-203ENST00000394925 POLR3CQ9BUI4 534 aaPredicted RBP23.27■■□□□ 1.32
TRAF4-203ENST00000394925 KIFC3Q9BVG8 833 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 POLD4Q9HCU8 107 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 KCNH3Q9ULD8 1083 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 MRPS23Q9Y3D9 190 aaKnown RBP23.27■■□□□ 1.32
TRAF4-203ENST00000394925 NCOR2Q9Y618 2525 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 PATJQ8NI35 1801 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 TMEM189-UBE2V1I3L0A0 370 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 TKTP29401 623 aaKnown RBP23.26■■□□□ 1.31
TRAF4-203ENST00000394925 CLCNKBP51801 687 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 CSTF1Q05048 431 aaKnown RBP23.26■■□□□ 1.31
TRAF4-203ENST00000394925 ZNF528Q3MIS6 628 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 DCAF4L1Q3SXM0 396 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 MCRS1Q96EZ8 462 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 PPP1R10Q96QC0 940 aaKnown RBP23.26■■□□□ 1.31
TRAF4-203ENST00000394925 OSBPL6Q9BZF3 934 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 GOLGA2P5Q9HBQ8 144 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 LTB4R2Q9NPC1 389 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 FBXO4Q9UKT5 387 aa23.26■■□□□ 1.31
TRAF4-203ENST00000394925 I3L4J1 428 aa23.25■■□□□ 1.31
TRAF4-203ENST00000394925 RBM25P49756 843 aaKnown RBP23.25■■□□□ 1.31
TRAF4-203ENST00000394925 PPP2R5AQ15172 486 aa23.25■■□□□ 1.31
TRAF4-203ENST00000394925 CD300LGQ6UXG3 332 aa23.25■■□□□ 1.31
TRAF4-203ENST00000394925 ERMNQ8TAM6 284 aa23.25■■□□□ 1.31
TRAF4-203ENST00000394925 RHOP08100 348 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 RPA1P27694 616 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 BRCC3P46736 316 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 ANAPC15P60006 121 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 UPP1Q16831 310 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 ZBTB41Q5SVQ8 909 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 NT5DC1Q5TFE4 455 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 ATF7IP2Q5U623 682 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 TPRG1Q6ZUI0 275 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 ANKS3Q6ZW76 656 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 RTL10Q7L3V2 364 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 DDX27Q96GQ7 796 aaKnown RBP23.24■■□□□ 1.31
TRAF4-203ENST00000394925 IFT74Q96LB3 600 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 PLA2G2FQ9BZM2 168 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 BACE2Q9Y5Z0 518 aa23.24■■□□□ 1.31
TRAF4-203ENST00000394925 TRAPPC3O43617 180 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 TARSP26639 723 aaKnown RBP23.23■■□□□ 1.31
TRAF4-203ENST00000394925 GUCY1B3Q02153 619 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 SLC5A9Q2M3M2 681 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 VARS2Q5ST30 1063 aaKnown RBP23.23■■□□□ 1.31
TRAF4-203ENST00000394925 C3orf58Q8NDZ4 430 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 ATRIPQ8WXE1 791 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 UROC1Q96N76 676 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 DLL3Q9NYJ7 618 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 NCDNQ9UBB6 729 aa23.23■■□□□ 1.31
TRAF4-203ENST00000394925 SPTLC1O15269 473 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 ECI2O75521 394 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 MAGEA9P43362 315 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 EFNA5P52803 228 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 ZNF174Q15697 407 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 POTEHQ6S545 545 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 HEBP1Q9NRV9 189 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 GDE1Q9NZC3 331 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 PCDHGA2Q9Y5H1 932 aa23.22■■□□□ 1.31
TRAF4-203ENST00000394925 SMIM28A0A1B0GU29 152 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 LRG1P02750 347 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 OR52Z1P0C646 297 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 CEBPBP17676 345 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 PTPN2P17706 415 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 ELF1P32519 619 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 SAFBQ15424 915 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRAF4-203ENST00000394925 RSPO4Q2I0M5 234 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-203ENST00000394925 TANGO2Q6ICL3 276 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 APBB1IPQ7Z5R6 666 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-203ENST00000394925 CLDN23Q96B33 292 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 BORCS6Q96GS4 357 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 NELL2Q99435 816 aa23.21■■□□□ 1.31
TRAF4-203ENST00000394925 SPTBN2O15020 2390 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 F5P12259 2224 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 K7ERI5 159 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 PRRG1O14668 218 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 NCAM2O15394 837 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ARPP19P56211 112 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ROR1Q01973 937 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 SOX4Q06945 474 aaPredicted RBP23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ECM1Q16610 540 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 TSSK4Q6SA08 328 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ZNF852Q6ZMS4 543 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 CEP120Q8N960 986 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ZNF461Q8TAF7 563 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 KIFAP3Q92845 792 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 BHMT2Q9H2M3 363 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ZSCAN32Q9NX65 697 aa23.2■■□□□ 1.3
TRAF4-203ENST00000394925 ARHGEF37A1IGU5 675 aa23.19■■□□□ 1.3
TRAF4-203ENST00000394925 YARSP54577 528 aaKnown RBP23.19■■□□□ 1.3
TRAF4-203ENST00000394925 OSTNP61366 133 aa23.19■■□□□ 1.3
TRAF4-203ENST00000394925 ZBTB44Q8NCP5 570 aa23.19■■□□□ 1.3
TRAF4-203ENST00000394925 ELSPBP1Q96BH3 223 aa23.19■■□□□ 1.3
TRAF4-203ENST00000394925 CORO1BQ9BR76 489 aa23.19■■□□□ 1.3
TRAF4-203ENST00000394925 CCDC94Q9BW85 323 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-203ENST00000394925 AVENQ9NQS1 362 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-203ENST00000394925 TNFSF13BQ9Y275 285 aa23.19■■□□□ 1.3
TRAF4-203ENST00000394925 WDR27A2RRH5 827 aa23.18■■□□□ 1.3
TRAF4-203ENST00000394925 ABLIM3O94929 683 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms