RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ZNF568Q3ZCX4 644 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 MPZL3Q6UWV2 235 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 GPBP1Q86WP2 473 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 ZDHHC14Q8IZN3 488 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TDRD5Q8NAT2 981 aaKnown RBP9.71□□□□□ -0.86
ATG4A-205ENST00000394892 RAD54LQ92698 747 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 AK8Q96MA6 479 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 MYADMQ96S97 322 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 ADPGKQ9BRR6 497 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TTPALQ9BTX7 342 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 C17orf75Q9HAS0 396 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 CNTN3Q9P232 1028 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 STK39Q9UEW8 545 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 RBM19Q9Y4C8 960 aaKnown RBP9.71□□□□□ -0.86
ATG4A-205ENST00000394892 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 ANKRD63C9JTQ0 380 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 TOM1L1O75674 476 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 ADH1AP07327 375 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 HARSP12081 509 aaKnown RBP9.7□□□□□ -0.86
ATG4A-205ENST00000394892 LONP1P36776 959 aaKnown RBP9.7□□□□□ -0.86
ATG4A-205ENST00000394892 TNFSF9P41273 254 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 GUCY2FP51841 1108 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 NTHL1P78549 312 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 SPAG1Q07617 926 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 MCL1Q07820 350 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 ZBTB6Q15916 424 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 PSMD5Q16401 504 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-205ENST00000394892 DCLRE1AQ6PJP8 1040 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 C15orf39Q6ZRI6 1047 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 HAUS6Q7Z4H7 955 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 CEP57Q86XR8 500 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 KCTD17Q8N5Z5 321 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 ST13P5Q8NFI4 369 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-205ENST00000394892 RSAD2Q8WXG1 361 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
ATG4A-205ENST00000394892 USP28Q96RU2 1077 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 TIPINQ9BVW5 301 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 FGFBP2Q9BYJ0 223 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 RHOBTB2Q9BYZ6 727 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 CCSER1Q9C0I3 900 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 WDR6Q9NNW5 1121 aaKnown RBP9.7□□□□□ -0.86
ATG4A-205ENST00000394892 TUBGCP4Q9UGJ1 667 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 FBXW11Q9UKB1 542 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 USTQ9Y2C2 406 aa9.7□□□□□ -0.86
ATG4A-205ENST00000394892 SF3B1O75533 1304 aaKnown RBP eCLIP9.7□□□□□ -0.861e-7■■■■■ 51.7
ATG4A-205ENST00000394892 TTC26A0AVF1 554 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 PPEF2O14830 753 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 SLC26A4O43511 780 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 NR1I2O75469 434 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ZMYND10O75800 440 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 B3GAT3O94766 335 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 C1RP00736 705 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 PIGRP01833 764 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ADRB2P07550 413 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 CXCL8P10145 99 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 NMT1P30419 496 aaKnown RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 UBA7P41226 1012 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 CEBPZQ03701 1054 aaKnown RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 RAB33AQ14088 237 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 MRPL58Q14197 206 aaKnown RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ZC2HC1CQ53FD0 456 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 SCARA3Q6AZY7 606 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ZPBP2Q6X784 338 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ZSWIM2Q8NEG5 633 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 HDAC7Q8WUI4 952 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 NKD2Q969F2 451 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 INTS4Q96HW7 963 aaKnown RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ACAP3Q96P50 834 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 CCDC94Q9BW85 323 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 STRA6Q9BX79 667 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 PRKD2Q9BZL6 878 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 PLEKHA4Q9H4M7 779 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 KCND2Q9NZV8 630 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 MTRRQ9UBK8 725 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 TBX20Q9UMR3 447 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
ATG4A-205ENST00000394892 SRPRBQ9Y5M8 271 aaKnown RBP9.69□□□□□ -0.86
ATG4A-205ENST00000394892 ZDBF2Q9HCK1 2354 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 CLUHO75153 1309 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 MYMKA6NI61 221 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 LACTBL1A8MY62 500 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 PODXLO00592 558 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 NARSO43776 548 aaKnown RBP9.68□□□□□ -0.86
ATG4A-205ENST00000394892 PPP1R37O75864 691 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 VNN2O95498 520 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 BMP15O95972 392 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 OR1D2P34982 312 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 DDIT3P35638 169 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 NBL1P41271 181 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 CLCN5P51795 746 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 WNT7BP56706 349 aa9.68□□□□□ -0.86
ATG4A-205ENST00000394892 GTF2BQ00403 316 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms