RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MPP2Q14168 576 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 ANKRD42Q8N9B4 389 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 IDI2Q9BXS1 227 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 SYNGAP1Q96PV0 1343 aa20.08■□□□□ 0.8
HOXC6-202ENST00000394331 RCN1Q15293 331 aa20.08■□□□□ 0.8
HOXC6-202ENST00000394331 GDAP1Q8TB36 358 aa20.08■□□□□ 0.8
HOXC6-202ENST00000394331 CRYGNQ8WXF5 182 aa20.08■□□□□ 0.8
HOXC6-202ENST00000394331 KCNK9Q9NPC2 374 aa20.08■□□□□ 0.8
HOXC6-202ENST00000394331 DNM3Q9UQ16 869 aa20.08■□□□□ 0.8
HOXC6-202ENST00000394331 NPHP3-ACAD11A0A0J9YXS1 232 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 CYP1A1P04798 512 aaPredicted RBP20.07■□□□□ 0.8
HOXC6-202ENST00000394331 CTNNA2P26232 953 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 RPL13P26373 211 aaKnown RBP20.07■□□□□ 0.8
HOXC6-202ENST00000394331 Q4G0T1 1027 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 TMEM179Q6ZVK1 233 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 ETNPPLQ8TBG4 499 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 ASCC2Q9H1I8 757 aaPredicted RBP20.07■□□□□ 0.8
HOXC6-202ENST00000394331 ZHX3Q9H4I2 956 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
HOXC6-202ENST00000394331 ECEL1O95672 775 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 GH1P01241 217 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 CREB1P16220 341 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 VCAM1P19320 739 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 STAT3P40763 770 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 FKBP1AP62942 108 aaKnown RBP20.07■□□□□ 0.8
HOXC6-202ENST00000394331 TCP10Q12799 353 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 LONRF1Q17RB8 773 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 ARSHQ5FYA8 562 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 HIC2Q96JB3 615 aa20.07■□□□□ 0.8
HOXC6-202ENST00000394331 PABPC4LP0CB38 370 aaKnown RBP20.06■□□□□ 0.8
HOXC6-202ENST00000394331 RPA1P27694 616 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
HOXC6-202ENST00000394331 SULT2A1Q06520 285 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 MAP7Q14244 749 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 PRR16Q569H4 304 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 SLC45A4Q5BKX6 768 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 TATDN1Q6P1N9 297 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 CATSPER3Q86XQ3 398 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 RFFLQ8WZ73 363 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 FAM20AQ96MK3 541 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 TUBB6Q9BUF5 446 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 SYNCQ9H7C4 482 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 UMODL1Q5DID0 1318 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 ASLP04424 464 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 SLURP2P0DP57 97 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 SPIRE1Q08AE8 756 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 PTPROQ16827 1216 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 POTEGQ6S5H5 508 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 OTUD6AQ7L8S5 288 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 MASTLQ96GX5 879 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 UIMC1Q96RL1 719 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 DDTLA6NHG4 134 aaPredicted RBP20.06■□□□□ 0.8
HOXC6-202ENST00000394331 BTBD19C9JJ37 291 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 F5H6K3 240 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 DDX3XO00571 662 aaKnown RBP eCLIP20.06■□□□□ 0.8
HOXC6-202ENST00000394331 ATP9BO43861 1147 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 PSMG1O95456 288 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 FOXN2P32314 431 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 CDR2Q01850 454 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 CEP128Q6ZU80 1094 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 FBXO11Q86XK2 927 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 LRRC43Q8N309 656 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 SYT2Q8N9I0 419 aaPredicted RBP20.06■□□□□ 0.8
HOXC6-202ENST00000394331 GMCL1P1Q8NEA9 526 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 UHMK1Q8TAS1 419 aaKnown RBP20.06■□□□□ 0.8
HOXC6-202ENST00000394331 ZNF398Q8TD17 642 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 GMCL1Q96IK5 515 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 TRAF3IP3Q9Y228 551 aa20.06■□□□□ 0.8
HOXC6-202ENST00000394331 PIM1P11309 404 aaPredicted RBP20.05■□□□□ 0.8
HOXC6-202ENST00000394331 MUTP22033 750 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 NR2F2P24468 414 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 SLC18A1P54219 525 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 USP46P62068 366 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 STRIP1Q5VSL9 837 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 FRMD5Q7Z6J6 570 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 KIAA0825Q8IV33 1275 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 CDC42EP4Q9H3Q1 356 aaKnown RBP20.05■□□□□ 0.8
HOXC6-202ENST00000394331 EPB41L1Q9H4G0 881 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 STK32BQ9NY57 414 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 FAM196BA6NMK8 535 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 ZWINTO95229 277 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 TMEM253P0C7T8 217 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 UCHL3P15374 230 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 CACNB3P54284 484 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 KCNH2Q12809 1159 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 CYP1B1Q16678 543 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 WDR72Q3MJ13 1102 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 MARK2Q7KZI7 788 aaKnown RBP20.05■□□□□ 0.8
HOXC6-202ENST00000394331 SIAH1Q8IUQ4 282 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 NME8Q8N427 588 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 CTNNBL1Q8WYA6 563 aaPredicted RBP20.05■□□□□ 0.8
HOXC6-202ENST00000394331 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
HOXC6-202ENST00000394331 IQCGQ9H095 443 aaKnown RBP20.05■□□□□ 0.8
HOXC6-202ENST00000394331 FAM198AQ9UFP1 575 aa20.05■□□□□ 0.8
HOXC6-202ENST00000394331 CAPN9O14815 690 aa20.04■□□□□ 0.8
HOXC6-202ENST00000394331 SREBF1P36956 1147 aa20.04■□□□□ 0.8
HOXC6-202ENST00000394331 ZC2HC1CQ53FD0 456 aaPredicted RBP20.04■□□□□ 0.8
HOXC6-202ENST00000394331 C10orf82Q8WW14 230 aa20.04■□□□□ 0.8
HOXC6-202ENST00000394331 DBNDD1Q9H9R9 158 aa20.04■□□□□ 0.8
HOXC6-202ENST00000394331 CCDC22O60826 627 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms