RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PFDN1O60925 122 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 YBX3P16989 372 aaKnown RBP eCLIP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 APOBEC3HQ6NTF7 200 aaKnown RBP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 RELL1Q8IUW5 271 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 NAT14Q8WUY8 206 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 ZNF653Q96CK0 615 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 CADM1Q9BY67 442 aaKnown RBP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 ZFP69BQ9UJL9 534 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 MTUS1Q9ULD2 1270 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 TMEM221A6NGB7 291 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 TBX10O75333 385 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 GH1P01241 217 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 ITGA2BP08514 1039 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 CREB1P16220 341 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 USP46P62068 366 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 PRPF4BQ13523 1007 aaKnown RBP23.16■■□□□ 1.3
CLDND1-202ENST00000394180 STAT4Q14765 748 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 NONOQ15233 471 aaKnown RBP eCLIP23.16■■□□□ 1.3
CLDND1-202ENST00000394180 PDK4Q16654 411 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 RHBDF2Q6PJF5 856 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 CCDC137Q6PK04 289 aaKnown RBP23.16■■□□□ 1.3
CLDND1-202ENST00000394180 MAPKAPK5Q8IW41 473 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 CDK5RAP3Q96JB5 506 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 PNMA5Q96PV4 448 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 TYW1Q9NV66 732 aaKnown RBP23.16■■□□□ 1.3
CLDND1-202ENST00000394180 PTTG2Q9NZH5 202 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 SLC26A4O43511 780 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 CYP1A1P04798 512 aaPredicted RBP23.16■■□□□ 1.3
CLDND1-202ENST00000394180 USP17L8P0C7I0 530 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 CYP2D6P10635 497 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 CPA3P15088 417 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 RGS2P41220 211 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 HNRNPDQ14103 355 aaKnown RBP23.16■■□□□ 1.3
CLDND1-202ENST00000394180 SPARCL1Q14515 664 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 TMEM119Q4V9L6 283 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 ACSBG2Q5FVE4 666 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 FAM26FQ5R3K3 315 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 RHOT2Q8IXI1 618 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 DDX12PQ92771 950 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 C18orf8Q96DM3 657 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 KRT82Q9NSB4 513 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 SENP1Q9P0U3 644 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 PSME4Q14997 1843 aa23.16■■□□□ 1.3
CLDND1-202ENST00000394180 VEGFAP15692 232 aaPredicted RBP23.15■■□□□ 1.3
CLDND1-202ENST00000394180 CRABP2P29373 138 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 RTP1P59025 263 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 EXOC3L4Q17RC7 722 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 CTC1Q2NKJ3 1217 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 USH1GQ495M9 461 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 EPM2AIP1Q7L775 607 aaPredicted RBP23.15■■□□□ 1.3
CLDND1-202ENST00000394180 OTUD6AQ7L8S5 288 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 MCM9Q9NXL9 1143 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 EURLQ9NYK6 297 aa23.15■■□□□ 1.3
CLDND1-202ENST00000394180 GSC2O15499 205 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 RAD21O60216 631 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 COILP38432 576 aaPredicted RBP23.14■■□□□ 1.3
CLDND1-202ENST00000394180 DSG1Q02413 1049 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 COASYQ13057 564 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 HHIPL2Q6UWX4 724 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 NEK8Q86SG6 692 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 RASGRP4Q8TDF6 673 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 DENND1AQ8TEH3 1009 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 ZDHHC7Q9NXF8 308 aa23.14■■□□□ 1.3
CLDND1-202ENST00000394180 SMG5Q9UPR3 1016 aaKnown RBP23.14■■□□□ 1.3
CLDND1-202ENST00000394180 PON1P27169 355 aa23.14■■□□□ 1.29
CLDND1-202ENST00000394180 UHMK1Q8TAS1 419 aaKnown RBP23.14■■□□□ 1.29
CLDND1-202ENST00000394180 GMLQ99445 158 aa23.14■■□□□ 1.29
CLDND1-202ENST00000394180 MIPEPQ99797 713 aa23.14■■□□□ 1.29
CLDND1-202ENST00000394180 LZTS2Q9BRK4 669 aa23.14■■□□□ 1.29
CLDND1-202ENST00000394180 TECP42680 631 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 RAP1GDS1P52306 607 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 UBAP2Q5T6F2 1119 aaKnown RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 FAM91A1Q658Y4 838 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 ACAD11Q709F0 780 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 CLNKQ7Z7G1 428 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 ZBTB8BQ8NAP8 495 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 SMYD1Q8NB12 490 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 RBM46Q8TBY0 533 aaKnown RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 U2AF1L4Q8WU68 220 aaKnown RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 DDX27Q96GQ7 796 aaKnown RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 ZDHHC15Q96MV8 337 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 MTMR9Q96QG7 549 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 KCTD10Q9H3F6 313 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 PCDH18Q9HCL0 1135 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 SAP30BPQ9UHR5 308 aaKnown RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 VAV1P15498 845 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 CACNB3P54284 484 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 WDR4P57081 412 aaKnown RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 BPIFB4P59827 614 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 PICALMQ13492 652 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 TAF1BQ53T94 588 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 CIAPIN1Q6FI81 312 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 CDC42EP5Q6NZY7 148 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 ZNF449Q6P9G9 518 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 DSTYKQ6XUX3 929 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 MIGA2Q7L4E1 593 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 ADGRG6Q86SQ4 1221 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 RSPH1Q8WYR4 309 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 DNAJC19Q96DA6 116 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms