RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CXCL8P10145 99 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 IGFBP6P24592 240 aaPredicted RBP33.55■■■□□ 2.96
CMTM4-202ENST00000394106 ITIH3Q06033 890 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 UPP1Q16831 310 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 RTP2Q5QGT7 225 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 PRSS55Q6UWB4 352 aaPredicted RBP33.55■■■□□ 2.96
CMTM4-202ENST00000394106 ZNF720Q7Z2F6 126 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 GLYCTKQ8IVS8 523 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 C18orf25Q96B23 403 aaPredicted RBP33.55■■■□□ 2.96
CMTM4-202ENST00000394106 TTPALQ9BTX7 342 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 PHF7Q9BWX1 381 aaPredicted RBP33.55■■■□□ 2.96
CMTM4-202ENST00000394106 ADAM7Q9H2U9 754 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 ST6GALNAC4Q9H4F1 302 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP33.55■■■□□ 2.96
CMTM4-202ENST00000394106 SEL1LQ9UBV2 794 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 PCDHA7Q9UN72 937 aa33.55■■■□□ 2.96
CMTM4-202ENST00000394106 PLXNA3P51805 1871 aa33.54■■■□□ 2.96
CMTM4-202ENST00000394106 C5orf42Q9H799 3197 aa33.54■■■□□ 2.96
CMTM4-202ENST00000394106 WEE2P0C1S8 567 aa33.54■■■□□ 2.96
CMTM4-202ENST00000394106 RPL17P18621 184 aaKnown RBP33.54■■■□□ 2.96
CMTM4-202ENST00000394106 TNFSF9P41273 254 aa33.54■■■□□ 2.96
CMTM4-202ENST00000394106 ELAVL2Q12926 359 aaKnown RBP33.54■■■□□ 2.96
CMTM4-202ENST00000394106 SLC39A4Q6P5W5 647 aa33.54■■■□□ 2.96
CMTM4-202ENST00000394106 MSTO1Q9BUK6 570 aa33.54■■■□□ 2.96
CMTM4-202ENST00000394106 PDCD11Q14690 1871 aaKnown RBP33.53■■■□□ 2.96
CMTM4-202ENST00000394106 TMEM189-UBE2V1I3L0A0 370 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 E2F4Q16254 413 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 HERC4Q5GLZ8 1057 aaPredicted RBP33.53■■■□□ 2.96
CMTM4-202ENST00000394106 ZBTB41Q5SVQ8 909 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 PALB2Q86YC2 1186 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 DDX27Q96GQ7 796 aaKnown RBP33.53■■■□□ 2.96
CMTM4-202ENST00000394106 RPGRIP1Q96KN7 1286 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 EPHX3Q9H6B9 360 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 PANK4Q9NVE7 773 aa33.53■■■□□ 2.96
CMTM4-202ENST00000394106 ANKRD63C9JTQ0 380 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 PODXLO00592 558 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 OGTO15294 1046 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 GLUD1P00367 558 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 MYBP10242 640 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 CREMQ03060 361 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 SPAG1Q07617 926 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 KYAT1Q16773 422 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 TMC5Q6UXY8 1006 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 GPR65Q8IYL9 337 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 IQUBQ8NA54 791 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 C3orf58Q8NDZ4 430 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 CUEDC2Q9H467 287 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 SFXN1Q9H9B4 322 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 MAN1C1Q9NR34 630 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 FNIP2Q9P278 1114 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 ZDHHC9Q9Y397 364 aa33.52■■■□□ 2.96
CMTM4-202ENST00000394106 A0A0B4J269 797 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 TISP43B9A030 160 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 GCNT3O95395 438 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 CD300LGQ6UXG3 332 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 HVCN1Q96D96 273 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 TNMDQ9H2S6 317 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 PLEKHA5Q9HAU0 1116 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 FAM13BQ9NYF5 915 aa33.51■■■□□ 2.95
CMTM4-202ENST00000394106 I3L4J1 428 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 SPATA31D3P0C874 917 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 PPP2R3AQ06190 1150 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 PSMD5Q16401 504 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.5■■■□□ 2.95
CMTM4-202ENST00000394106 SPATA31D4Q6ZUB0 917 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 RIPOR3Q96MK2 946 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 LRRC27Q9C0I9 530 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 IKZF4Q9H2S9 585 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 RPF1Q9H9Y2 349 aaKnown RBP33.5■■■□□ 2.95
CMTM4-202ENST00000394106 RCOR1Q9UKL0 485 aa33.5■■■□□ 2.95
CMTM4-202ENST00000394106 VWA8A3KMH1 1905 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 FRMD3A2A2Y4 597 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 LOC730098B7Z3J9 87 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 FAM189A1O60320 539 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 PPP1R37O75864 691 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 SP100P23497 879 aaPredicted RBP33.49■■■□□ 2.95
CMTM4-202ENST00000394106 MTHFRP42898 656 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 BRCC3P46736 316 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 BECN1Q14457 450 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 ENOX2Q16206 610 aaKnown RBP33.49■■■□□ 2.95
CMTM4-202ENST00000394106 CCDC65Q8IXS2 484 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 LNX1Q8TBB1 728 aaPredicted RBP33.49■■■□□ 2.95
CMTM4-202ENST00000394106 FEZF2Q8TBJ5 459 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 PIK3R5Q8WYR1 880 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 KIF12Q96FN5 646 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 CHAMP1Q96JM3 812 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 NECTIN4Q96NY8 510 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 POMKQ9H5K3 350 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 OLFML3Q9NRN5 406 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 KBTBD4Q9NVX7 518 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 TUBGCP4Q9UGJ1 667 aa33.49■■■□□ 2.95
CMTM4-202ENST00000394106 TTC26A0AVF1 554 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 LACTBL1A8MY62 500 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 POLR2DO15514 142 aaKnown RBP33.48■■■□□ 2.95
CMTM4-202ENST00000394106 TRAPPC3O43617 180 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 ATAT1Q5SQI0 421 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 RESP18Q5W5W9 173 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 ADALQ6DHV7 355 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 SLFN12LQ6IEE8 588 aa33.48■■■□□ 2.95
CMTM4-202ENST00000394106 ELMSAN1Q6PJG2 1045 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms