RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DNAL1Q4LDG9 190 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 CEP55Q53EZ4 464 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 EGFLAMQ63HQ2 1017 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 CNNM4Q6P4Q7 775 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ILDR1Q86SU0 546 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 HEATR4Q86WZ0 1026 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF444Q8N0Y2 327 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 BORCS5Q969J3 196 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 HNRNPABQ99729 332 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 MARCH7Q9H992 704 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ANKFY1Q9P2R3 1169 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 USP20Q9Y2K6 914 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ANGPTL3Q9Y5C1 460 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 MAGEB6P1A0A0J9YX57 407 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 STAM2O75886 525 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PDE8BO95263 885 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 HSPD1P10809 573 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 INHBCP55103 352 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 GSTM4Q03013 218 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ZC2HC1CQ53FD0 456 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 KLHDC7AQ5VTJ3 777 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PPP2R2DQ66LE6 453 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SPATA5Q8NB90 893 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 TNIP2Q8NFZ5 429 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 HEPHQ9BQS7 1158 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ERP44Q9BS26 406 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 DHX36Q9H2U1 1008 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 IFT122Q9HBG6 1241 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SRP68Q9UHB9 627 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SPO11Q9Y5K1 396 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 UBR1Q8IWV7 1749 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 EXOC3O60645 756 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ANPEPP15144 967 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 YWHAGP61981 247 aaKnown RBP eCLIP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 RPS8P62241 208 aaKnown RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SMUG1Q53HV7 270 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 P2RX5Q93086 422 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CFAP36Q96G28 342 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SLC7A5P2Q9GIP4 190 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 TRPV5Q9NQA5 729 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 HEY2Q9UBP5 337 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 RSL24D1Q9UHA3 163 aaKnown RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 TRPC5Q9UL62 973 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 GOLGA8JA6NMD2 632 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PPP1R3GB7ZBB8 358 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MAP3K13O43283 966 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 TBX10O75333 385 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF12P17014 697 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 KRT6CP48668 564 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CASP5P51878 434 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 NR1H2P55055 460 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 GPSM2P81274 684 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MDM2Q00987 491 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MKRN4PQ13434 485 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PRKG1Q13976 671 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SUSD4Q5VX71 490 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 FRA10AC1Q70Z53 315 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 GPR141Q7Z602 305 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ECHDC2Q86YB7 292 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SLC15A3Q8IY34 581 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ENDOVQ8N8Q3 282 aaKnown RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CKAP2Q8WWK9 683 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 OSBPL8Q9BZF1 889 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SAR1AQ9NR31 198 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 STMN3Q9NZ72 180 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CLEC11AQ9Y240 323 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF839A8K0R7 811 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CFAP99D6REC4 459 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 E9PMD0 336 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CDH16O75309 829 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 OR6B1O95007 311 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CYP19A1P11511 503 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 HSPA6P17066 643 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 NR5A1Q13285 461 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 LRP8Q14114 963 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 TRIP13Q15645 432 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 FXNQ16595 210 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MAN2A1Q16706 1144 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PRR23CQ6ZRP0 262 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF662Q6ZS27 426 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 USP49Q70CQ1 688 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CATIPQ7Z7H3 387 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CATSPER1Q8NEC5 780 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 TRIM63Q969Q1 353 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MTMR8Q96EF0 704 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MKNK1Q9BUB5 465 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SEMA4AQ9H3S1 761 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 NOL6Q9H6R4 1146 aaKnown RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 C12orf4Q9NQ89 552 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 UVRAGQ9P2Y5 699 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PALLDQ8WX93 1383 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CCDC162PA2VCL2 907 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ATP9BO43861 1147 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms