RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 KIF12Q96FN5 646 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 DDX27Q96GQ7 796 aaKnown RBP16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 ASB7Q9H672 318 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 KIAA1586Q9HCI6 787 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 ADAM28Q9UKQ2 775 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 TRIP11Q15643 1979 aa16.35■□□□□ 0.21
IGHV3-53-201ENST00000390627 LACTBL1A8MY62 500 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 TMEM189-UBE2V1I3L0A0 370 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 TGFB1I1O43294 461 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 TADA2AO75478 443 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 IL18RAPO95256 599 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 ERVFC1P60507 584 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 SKIV2LQ15477 1246 aaKnown RBP16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 TCEAL5Q5H9L2 206 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 PLPP4Q5VZY2 271 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 FUT10Q6P4F1 479 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 CRELD2Q6UXH1 353 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 BRSK2Q8IWQ3 736 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 SPATA20Q8TB22 786 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 PAAF1Q9BRP4 392 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 HERC2P3Q9BVR0 1158 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 ZBP1Q9H171 429 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 PCIF1Q9H4Z3 704 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 RBAKQ9NYW8 714 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 HSPBP1Q9NZL4 362 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 DERAQ9Y315 318 aa16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.21
IGHV3-53-201ENST00000390627 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.21
IGHV3-53-201ENST00000390627 FSD2A1L4K1 749 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 B3GAT3O94766 335 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 KIF4AO95239 1232 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 SOD2P04179 222 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 CTSAP10619 480 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 CYP3A5P20815 502 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 RPL9P32969 192 aaKnown RBP16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 SOX4Q06945 474 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 UPP1Q16831 310 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 JADE1Q6IE81 842 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 GUF1Q8N442 669 aaKnown RBP16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 BEST2Q8NFU1 509 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 GOLGA2P5Q9HBQ8 144 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 SSX2IPQ9Y2D8 614 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
IGHV3-53-201ENST00000390627 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 ZNF233A6NK53 670 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 F8W810 466 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 PODXLO00592 558 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 PDXKO00764 312 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 CLIC2O15247 247 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 NCK2O43639 380 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 URODP06132 367 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 CA8P35219 290 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 CYP2J2P51589 502 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 CLCNKBP51801 687 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 SPAG1Q07617 926 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 TMEM132DQ14C87 1099 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 ZBTB6Q15916 424 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 ZNF658Q5TYW1 1059 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 XXYLT1Q8NBI6 393 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 RABGGTAQ92696 567 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 C18orf25Q96B23 403 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 CDCA3Q99618 268 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 VN1R3Q9BXE9 311 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 KCTD10Q9H3F6 313 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 TUBGCP4Q9UGJ1 667 aa16.32■□□□□ 0.2
IGHV3-53-201ENST00000390627 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 TRAPPC3O43617 180 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 CALUO43852 315 aaPredicted RBP16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 CXCL14O95715 111 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 NFICP08651 508 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 LRPAP1P30533 357 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 SURF1Q15526 300 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 SPATA1Q5VX52 437 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 KIAA1841Q6NSI8 718 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 MRPL43Q8N983 215 aaKnown RBP16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 ERCC4Q92889 916 aaPredicted RBP16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 TLE6Q9H808 572 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 MRPL17Q9NRX2 175 aaKnown RBP16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 PCDHGC5Q9Y5F6 944 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 IRAK3Q9Y616 596 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 MYO7AQ13402 2215 aa16.31■□□□□ 0.2
IGHV3-53-201ENST00000390627 C2orf71A6NGG8 1288 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms