RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 COL15A1P39059 1388 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 PAPOLAP51003 745 aaKnown RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 ZNF568Q3ZCX4 644 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 ZMAT2Q96NC0 199 aaKnown RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 KCNK16Q96T55 309 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 KDM4CQ9H3R0 1056 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 ZBTB12Q9Y330 459 aaPredicted RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 PTPRMP28827 1452 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 ACTR2P61160 394 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 LMBRD2Q68DH5 695 aaPredicted RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 FOXR1Q6PIV2 292 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 C1orf228Q6PIY5 440 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 AGR3Q8TD06 166 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 GFM2Q969S9 779 aaKnown RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 EIF2AQ9BY44 585 aaKnown RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 OVOS2A0A0G2JMS6 1433 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 SSTR3P32745 418 aaPredicted RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 ACTRT1Q8TDG2 376 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 EPS8L3Q8TE67 593 aaKnown RBP19.38■□□□□ 0.69
SSC5D-201ENST00000389623 KIFC3Q9BVG8 833 aa19.38■□□□□ 0.69
SSC5D-201ENST00000389623 ATMINO43313 823 aaPredicted RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 E2F6O75461 281 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 TFRCP02786 760 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 RARGP13631 454 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 RPA1P27694 616 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 AARSP49588 968 aaKnown RBP eCLIP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 ZNF200P98182 395 aaPredicted RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 POU5F1BQ06416 359 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 C3orf62Q6ZUJ4 267 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 NSL1Q96IY1 281 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 SENP7Q9BQF6 1050 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 DLC1Q96QB1 1528 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 APRTP07741 180 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 OSBPP22059 807 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 ZC2HC1CQ53FD0 456 aaPredicted RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 ZC3H15Q8WU90 426 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 PPP1R16BQ96T49 567 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 ZC3H7BQ9UGR2 993 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 ACADSP16219 412 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 TARSP26639 723 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 SARSP49591 514 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 AP1B1Q10567 949 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 SWSAP1Q6NVH7 229 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 BTNL9Q6UXG8 535 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 TEKT4Q8WW24 435 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 FAM118BQ9BPY3 351 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 FEM1BQ9UK73 627 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 CTCFP49711 727 aaPredicted RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 DAB2IPQ5VWQ8 1189 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 GJB7Q6PEY0 223 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 PACSIN1Q9BY11 444 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 RAB6BQ9NRW1 208 aa19.37■□□□□ 0.69
SSC5D-201ENST00000389623 CPSF3Q9UKF6 684 aaKnown RBP19.37■□□□□ 0.69
SSC5D-201ENST00000389623 SYCE1LA8MT33 242 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 RASA1P20936 1047 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 SMAD1Q15797 465 aaKnown RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 PSPC1Q8WXF1 523 aaKnown RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 POLR3CQ9BUI4 534 aaPredicted RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 THAP2Q9H0W7 228 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 GPC3P51654 580 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 DUOXA2Q1HG44 320 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 ZSWIM1Q9BR11 485 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 DHX35Q9H5Z1 703 aaKnown RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 RAVER2Q9HCJ3 691 aaKnown RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 PCDHB2Q9Y5E7 798 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 F5H423 210 aaPredicted RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 H3BRJ5 948 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 THAP11Q96EK4 314 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 SLC12A6Q9UHW9 1150 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 GTF3C4Q9UKN8 822 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 UBTFL6P0CB48 400 aaPredicted RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 PTK7Q13308 1070 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 SNRNP35Q16560 246 aaKnown RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 NT5DC1Q5TFE4 455 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 HDAC7Q8WUI4 952 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 PRPF31Q8WWY3 499 aaKnown RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 MTMR8Q96EF0 704 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 FAM167AQ96KS9 214 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 MTRQ99707 1265 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 POLR3FQ9H1D9 316 aaPredicted RBP19.36■□□□□ 0.69
SSC5D-201ENST00000389623 SPC25Q9HBM1 224 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 PLEKHG2Q9H7P9 1386 aa19.36■□□□□ 0.69
SSC5D-201ENST00000389623 PIK3R2O00459 728 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 PDHBP11177 359 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 CENPCQ03188 943 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 FBXL16Q8N461 479 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 NSUN6Q8TEA1 469 aaKnown RBP19.35■□□□□ 0.69
SSC5D-201ENST00000389623 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.35■□□□□ 0.69
SSC5D-201ENST00000389623 NBPF3Q9H094 633 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 KCND2Q9NZV8 630 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 CHMP2BQ9UQN3 213 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 CPS1P31327 1500 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 NPR1P16066 1061 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 RWDD4Q6NW29 188 aaKnown RBP19.35■□□□□ 0.69
SSC5D-201ENST00000389623 SUGP1Q8IWZ8 645 aaKnown RBP19.35■□□□□ 0.69
SSC5D-201ENST00000389623 DAGLBQ8NCG7 672 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 C18orf8Q96DM3 657 aa19.35■□□□□ 0.69
SSC5D-201ENST00000389623 HIC2Q96JB3 615 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms