RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 SPC25Q9HBM1 224 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 OSGEPQ9NPF4 335 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 IPO11Q9UI26 975 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 ZWINTO95229 277 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 PSMC6P62333 389 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 CENPCQ03188 943 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 WDR59Q6PJI9 974 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 TMEM143Q96AN5 459 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 AGBL1Q96MI9 1066 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 TRIM4Q9C037 500 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 MAGED2Q9UNF1 606 aaPredicted RBP17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 DPY19L2Q6NUT2 758 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 MOV10L1Q9BXT6 1211 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 TPX2Q9ULW0 747 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 USH1CQ9Y6N9 552 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 WTIPA6NIX2 430 aaPredicted RBP17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 IREB2P48200 963 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 ANKMY2Q8IV38 441 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 TTC39CQ8N584 583 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 PBX1P40424 430 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 CDH6P55285 790 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 ACAD10Q6JQN1 1059 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 C18orf8Q96DM3 657 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 CYTH2Q99418 400 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 HNRNPH1P31943 449 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 FUT2Q10981 343 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 RAPGEF5Q92565 580 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 PPCSQ9HAB8 311 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 EPS15L1Q9UBC2 864 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 TBX20Q9UMR3 447 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 KNDC1Q76NI1 1749 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 CES2O00748 559 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 KIF3CO14782 793 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 GZMAP12544 262 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 MAGEA4P43358 317 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 STAT5BP51692 787 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 EIF3EP60228 445 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM163AQ96GL9 167 aaPredicted RBP17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 AFG3L2Q9Y4W6 797 aa17.06■□□□□ 0.32
PTPRN2-201ENST00000389413 IGSF9BQ9UPX0 1349 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 CFAP69A5D8W1 941 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 MAFGO15525 162 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 KPNA2P52292 529 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 PIGHQ14442 188 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 ZNF662Q6ZS27 426 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 KCNK18Q7Z418 384 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 KCNV2Q8TDN2 545 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 SERPINB12Q96P63 405 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 CCDC68Q9H2F9 335 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 SGPL1O95470 568 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 GYS1P13807 737 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 SHMT1P34896 483 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 COG2Q14746 738 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 RNF149Q8NC42 400 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 GMCL1P1Q8NEA9 526 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM96AQ9H5X1 160 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 PIK3C2AO00443 1686 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 HMGCS2P54868 508 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 SPOPLQ6IQ16 392 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 RSBN1LQ6PCB5 846 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 ZC3H18Q86VM9 953 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 FBXO25Q8TCJ0 367 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 TEX13BQ9BXU2 312 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 C17orf75Q9HAS0 396 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 ZNRF3Q9ULT6 936 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 PDE2AO00408 941 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 MIIPQ5JXC2 388 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 MSL3Q8N5Y2 521 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 WDR35Q9P2L0 1181 aa17.05■□□□□ 0.32
PTPRN2-201ENST00000389413 ARP10275 920 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 PLCB4Q15147 1175 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 WDR72Q3MJ13 1102 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 HSP90AA5PQ58FG0 334 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 NUDCD3Q8IVD9 361 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 MCEEQ96PE7 176 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 NUDCD1Q96RS6 583 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 CBWD1Q9BRT8 395 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 EXTL3O43909 919 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 HSPA4LO95757 839 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 RARGP13631 454 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 PRKCEQ02156 737 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 MYBPC2Q14324 1141 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 EMC2Q15006 297 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 RIBC1Q8N443 379 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 ACER1Q8TDN7 264 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM118BQ9BPY3 351 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 PSMC3IPQ9P2W1 217 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 TCHHQ07283 1943 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 PRKCBP05771 671 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 RALAP11233 206 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms