RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 PARK7Q99497 189 aaKnown RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 MPHOSPH6Q99547 160 aaKnown RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 NENFQ9UMX5 172 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 PCDHB4Q9Y5E5 795 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 PCDHGC5Q9Y5F6 944 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 BZW2Q9Y6E2 419 aaKnown RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 LRRC37A2A6NM11 1700 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 PLXNB2O15031 1838 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 IGKV6-21A0A0C4DH24 114 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 ABLIM1O14639 778 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 TOM1L1O75674 476 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 MYCP01106 439 aaPredicted RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 NOP14P78316 857 aaKnown RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 CRHR2Q13324 411 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 MYBPC2Q14324 1141 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 PSMD6Q15008 389 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 RPS6KA1Q15418 735 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 RUFY4Q6ZNE9 571 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 DDX42Q86XP3 938 aaKnown RBP eCLIP10.91□□□□□ -0.66
LTN1-203ENST00000389195 RIN2Q8WYP3 895 aaPredicted RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 ALG3Q92685 438 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 OSMRQ99650 979 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 FAM118BQ9BPY3 351 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 C1orf112Q9NSG2 853 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 TJP2Q9UDY2 1190 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 HBP1O60381 514 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 GLI1P08151 1106 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 MMP3P08254 477 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 ARF4P18085 180 aaPredicted RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 IGFBP6P24592 240 aaPredicted RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 FAM193AP78312 1265 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 HTRA3P83110 453 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 PPFIA1Q13136 1202 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 LAMC2Q13753 1193 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 GRIK4Q16099 956 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 CYP4F22Q6NT55 531 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 C15orf39Q6ZRI6 1047 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 IFT81Q8WYA0 676 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 DDX1Q92499 740 aaKnown RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 LPIN3Q9BQK8 851 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 ZSWIM1Q9BR11 485 aa10.91□□□□□ -0.66
LTN1-203ENST00000389195 CELF4Q9BZC1 486 aaKnown RBP10.91□□□□□ -0.66
LTN1-203ENST00000389195 TCRBV7S2A1N4TA0A589 114 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 HCRTO43612 131 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 KIF4AO95239 1232 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 PGK1P00558 417 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 GJC1P36383 396 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 PLA2G4AP47712 749 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 FAM110CQ1W6H9 321 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 WDR44Q5JSH3 913 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 MTHFD1LQ6UB35 978 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 NT5DC3Q86UY8 548 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 ZBTB8OSQ8IWT0 167 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 RNF10Q8N5U6 811 aaKnown RBP10.9□□□□□ -0.66
LTN1-203ENST00000389195 TMC2Q8TDI7 906 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 OSBPL7Q9BZF2 842 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 TRIM31Q9BZY9 425 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 CDT1Q9H211 546 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 KLK14Q9P0G3 267 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 HMGXB4Q9UGU5 601 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 COQ4Q9Y3A0 265 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 STYXL1Q9Y6J8 313 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 TRIP11Q15643 1979 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 ANO9A1A5B4 782 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 LACTBL1A8MY62 500 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 TREHO43280 583 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 ZRANB2O95218 330 aaKnown RBP eCLIP10.9□□□□□ -0.66
LTN1-203ENST00000389195 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
LTN1-203ENST00000389195 PTENP60484 403 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 AMHR2Q16671 573 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 SHCBP1Q8NEM2 672 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 PPTC7Q8NI37 304 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 MORC4Q8TE76 937 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 DNAJB3Q8WWF6 145 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 ZNF653Q96CK0 615 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 KLHL11Q9NVR0 708 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 ALG6Q9Y672 507 aa10.9□□□□□ -0.66
LTN1-203ENST00000389195 STRNO43815 780 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 AOC2O75106 756 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 MYL3P08590 195 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 HOXC6P09630 235 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 RRM1P23921 792 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 AKAP5P24588 427 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 TNNT3P45378 269 aaPredicted RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 GCLCP48506 637 aaPredicted RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 PDE6CP51160 858 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 MXD4Q14582 209 aaPredicted RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 WDR72Q3MJ13 1102 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 DUSP28Q4G0W2 176 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 BEND6Q5SZJ8 279 aaPredicted RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 ACSF2Q96CM8 615 aaPredicted RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 FAM167AQ96KS9 214 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 C11orf70Q9BRQ4 267 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 NUP85Q9BW27 656 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms