RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 NUP88Q99567 741 aaPredicted RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 C7orf25Q9BPX7 421 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 SENP6Q9GZR1 1112 aaPredicted RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF768Q9H5H4 540 aaKnown RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 MMRN2Q9H8L6 949 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 KLHL11Q9NVR0 708 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 SRRDQ9UH36 339 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 SAP30BPQ9UHR5 308 aaKnown RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 AJAP1Q9UKB5 411 aaPredicted RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 SORCS3Q9UPU3 1222 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 MRFAP1Q9Y605 127 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 ACTL7AQ9Y615 435 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 CFAP20Q9Y6A4 193 aaKnown RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 MYBBP1AQ9BQG0 1328 aaKnown RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF185O15231 689 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 FAM20BO75063 409 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 ABLIM3O94929 683 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 POMCP01189 267 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 ELANEP08246 267 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 ATP5JP18859 108 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 AKAP5P24588 427 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 NEK2P51955 445 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 CHN2P52757 468 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 FAM189BP81408 668 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 TLE1Q04724 770 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 KLF10Q13118 480 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 RAB39AQ14964 217 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 PTPN21Q16825 1174 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 C3orf36Q3SXR2 165 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 PDCD4Q53EL6 469 aaKnown RBP3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 EFCAB2Q5VUJ9 269 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF627Q7L945 461 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 LDLRAD3Q86YD5 345 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 DPF2Q92785 391 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 PGBD4Q96DM1 585 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 BOD1Q96IK1 185 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 ADAM2Q99965 735 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF341Q9BYN7 854 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 EPC1Q9H2F5 836 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 SPON1Q9HCB6 807 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC2A4RGQ9NR83 387 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 DDX56Q9NY93 547 aaKnown RBP3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 SERPINB13Q9UIV8 391 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 INTUQ9ULD6 942 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 DNM3Q9UQ16 869 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 PCDHB1Q9Y5F3 818 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 HS3ST3A1Q9Y663 406 aa3.1□□□□□ -1.91
RNU6-541P-201ENST00000384709 PCSK5Q92824 1860 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 CENPVL1A0A0U1RR11 272 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 E2F8A0AVK6 867 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 CCDC154A6NI56 674 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 FOXN1O15353 648 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC16A6O15403 523 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 RPS6KA4O75676 772 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 SCAF4O95104 1147 aaKnown RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 FSHBP01225 129 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 POU2F2P09086 479 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 PDGFRBP09619 1106 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 SPATA31D3P0C874 917 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 ALAS1P13196 640 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 LAG3P18627 525 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 VCAM1P19320 739 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 NCLP19338 710 aaKnown RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 RNASE9P60153 205 aaKnown RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 MCL1Q07820 350 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 SCAPQ12770 1279 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 PABPC1LQ4VXU2 614 aaKnown RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 SPATA31D4Q6ZUB0 917 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 MIGA2Q7L4E1 593 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 Q8NA96 180 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 NLGN4YQ8NFZ3 816 aaPredicted RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 CPT1CQ8TCG5 803 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 NUP133Q8WUM0 1156 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 CLIP3Q96DZ5 547 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 COQ10AQ96MF6 247 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 MYOCQ99972 504 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 C11orf54Q9H0W9 315 aaPredicted RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 CSRNP2Q9H175 543 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 NRDE2Q9H7Z3 1164 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 AKIP1Q9NQ31 210 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 FBXO34Q9NWN3 711 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 SYBUQ9NX95 663 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 TRPM5Q9NZQ8 1165 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 EIF2B4Q9UI10 523 aaKnown RBP3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 FPGT-TNNI3KV9GXZ4 949 aa3.09□□□□□ -1.91
RNU6-541P-201ENST00000384709 hCG_2014768A0A024R1R8 64 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 PIPSLA2A3N6 862 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 GRID2IPA4D2P6 1211 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 NT5C1B-RDH14C9J2C7 533 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 XPOTO43592 962 aaKnown RBP3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 SLC43A1O75387 559 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 RFPL1O75677 317 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 PRSS23O95084 383 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 ADH4P08319 380 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 FTH1P19P0C7X4 201 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 RAP2AP10114 183 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 EGR2P11161 476 aaPredicted RBP3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 CKBP12277 381 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 PDCP20941 246 aa3.08□□□□□ -1.92
RNU6-541P-201ENST00000384709 TGM1P22735 817 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms