RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 KAT5Q92993 513 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 RGMAQ96B86 450 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 MTFMTQ96DP5 389 aaKnown RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PHACTR3Q96KR7 559 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PACSIN1Q9BY11 444 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 ZNF341Q9BYN7 854 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 KCNH6Q9H252 994 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 ZNF703Q9H7S9 590 aaPredicted RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 G3BP2Q9UN86 482 aaKnown RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 EID1Q9Y6B2 187 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 HAUS5O94927 633 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 FTLP02792 175 aaPredicted RBP4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 AMY1AP04745 511 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 GNAI3P08754 354 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 FTH1P19P0C7X4 201 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 FPR1P21462 350 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 EDNRBP24530 442 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 PTGS2P35354 604 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 IL12RB1P42701 662 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 GNAI1P63096 354 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 NHLH2Q02577 135 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 TARDBPQ13148 414 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 GTF2H3Q13889 308 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 UBXN2BQ14CS0 331 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 DACT2Q5SW24 774 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 USP51Q70EK9 711 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 GDF7Q7Z4P5 450 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 SPRED1Q7Z699 444 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 CATIPQ7Z7H3 387 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 GRAMD1CQ8IYS0 662 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZGPATQ8N5A5 531 aaKnown RBP4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 CAMKK1Q8N5S9 505 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 NSUN6Q8TEA1 469 aaKnown RBP4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 RAB24Q969Q5 203 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 MVB12AQ96EY5 273 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 FAM167AQ96KS9 214 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 AIFM3Q96NN9 605 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 RHOBTB2Q9BYZ6 727 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 VPS11Q9H270 941 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 TRPM5Q9NZQ8 1165 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 FAM30AQ9NZY2 134 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
RNU6-39P-201ENST00000384344 GAGE12BA1L429 117 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GOLGA6CA6NDK9 693 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GOLGA6BA6NDN3 693 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 RNASET2O00584 256 aaKnown RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GRM6O15303 877 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 AP1G1O43747 822 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 ITGB1P05556 798 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 CD1AP06126 327 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GOLGA6DP0CG33 693 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 APOBEC3AP31941 199 aaPredicted RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 CHN2P52757 468 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 RNASE9P60153 205 aaKnown RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 ATP8B2P98198 1209 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 FOXE3Q13461 319 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 TUBA3CQ13748 450 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 TOB2Q14106 344 aaPredicted RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 PUM1Q14671 1186 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 NFE2Q16621 373 aaPredicted RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 SPDYE7PQ495Y7 208 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 C1QL3Q5VWW1 255 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 ARMC6Q6NXE6 501 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 TUBA3EQ6PEY2 450 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 FOXR2Q6PJQ5 311 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 MED25Q71SY5 747 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 UBE3BQ7Z3V4 1068 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF276Q8N554 614 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 FITM2Q8N6M3 262 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 IL17DQ8TAD2 202 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 IFI44Q8TCB0 444 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 SLC25A43Q8WUT9 341 aaPredicted RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 CLIP3Q96DZ5 547 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 C1GALT1C1Q96EU7 318 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 SLC46A2Q9BY10 475 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 RTFDC1Q9BY42 306 aaPredicted RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GTPBP4Q9BZE4 634 aaKnown RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 RNPEPQ9H4A4 650 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 GOLGA6AQ9NYA3 693 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 FEZ2Q9UHY8 353 aaPredicted RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 THRAP3Q9Y2W1 955 aaKnown RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 REXO2Q9Y3B8 237 aaKnown RBP4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 PCDHB1Q9Y5F3 818 aa4.26□□□□□ -1.73
RNU6-39P-201ENST00000384344 TCRBV7S2A1N4TA0A589 114 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 DRGXA6NNA5 263 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 FAM20BO75063 409 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 SCGB1D2O95969 90 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 TLE1Q04724 770 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 NOGQ13253 232 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 LSM12Q3MHD2 195 aaKnown RBP4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 MINDY4Q4G0A6 757 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 MIIPQ5JXC2 388 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 SLC4A10Q6U841 1118 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 RHOT2Q8IXI1 618 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 PRR18Q8N4B5 295 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 CACTINQ8WUQ7 758 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms