RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 SMIM28A0A1B0GU29 152 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 PRR23AA6NEV1 266 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 POU2F2P09086 479 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 OSTNP61366 133 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 NTHL1P78549 312 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 RTL10Q7L3V2 364 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 FRMD5Q7Z6J6 570 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 CEP120Q8N960 986 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 DDX27Q96GQ7 796 aaKnown RBP28.97■■■□□ 2.23
NPHP3-202ENST00000383282 KIF2CQ99661 725 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 TCHPQ9BT92 498 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 TIPINQ9BVW5 301 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 GOLGA2P5Q9HBQ8 144 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 ARHGEF3Q9NR81 526 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 SLC2A4RGQ9NR83 387 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 ARHGAP28Q9P2N2 729 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 BACE2Q9Y5Z0 518 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 CDY1Q9Y6F8 540 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 DOCK8Q8NF50 2099 aa28.97■■■□□ 2.23
NPHP3-202ENST00000383282 PP2D1A8MPX8 630 aa28.96■■■□□ 2.23
NPHP3-202ENST00000383282 TKTP29401 623 aaKnown RBP28.96■■■□□ 2.23
NPHP3-202ENST00000383282 RINT1Q6NUQ1 792 aa28.96■■■□□ 2.23
NPHP3-202ENST00000383282 MTSS1LQ765P7 747 aa28.96■■■□□ 2.23
NPHP3-202ENST00000383282 ZFHX2Q9C0A1 2572 aaPredicted RBP28.96■■■□□ 2.23
NPHP3-202ENST00000383282 PHLDB3Q6NSJ2 640 aa28.95■■■□□ 2.22
NPHP3-202ENST00000383282 DAW1Q8N136 415 aa28.95■■■□□ 2.22
NPHP3-202ENST00000383282 ACAP3Q96P50 834 aa28.95■■■□□ 2.22
NPHP3-202ENST00000383282 RUSC1Q9BVN2 902 aa28.95■■■□□ 2.22
NPHP3-202ENST00000383282 TARS2Q9BW92 718 aaKnown RBP28.95■■■□□ 2.22
NPHP3-202ENST00000383282 PTPRHQ9HD43 1115 aa28.95■■■□□ 2.22
NPHP3-202ENST00000383282 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.95■■■□□ 2.22
NPHP3-202ENST00000383282 KCNG1Q9UIX4 513 aa28.95■■■□□ 2.22
NPHP3-202ENST00000383282 MCF2P10911 925 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 CDC25AP30304 524 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 BRCC3P46736 316 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 XKR4Q5GH76 650 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 MCTP1Q6DN14 999 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 C1orf186Q6ZWK4 172 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 ST13P5Q8NFI4 369 aaPredicted RBP28.94■■■□□ 2.22
NPHP3-202ENST00000383282 FGF13Q92913 245 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 FGF14Q92915 247 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 MYO15AQ9UKN7 3530 aa28.94■■■□□ 2.22
NPHP3-202ENST00000383282 PODXLO00592 558 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 IGFBP6P24592 240 aaPredicted RBP28.93■■■□□ 2.22
NPHP3-202ENST00000383282 STRN3Q13033 797 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 ZRSR1Q15695 479 aaKnown RBP28.93■■■□□ 2.22
NPHP3-202ENST00000383282 PABPC1LQ4VXU2 614 aaKnown RBP28.93■■■□□ 2.22
NPHP3-202ENST00000383282 RILPL1Q5EBL4 403 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 PARM1Q6UWI2 310 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 MPZL3Q6UWV2 235 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 CD300LGQ6UXG3 332 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 ALKAL1Q6UXT8 129 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 C3orf58Q8NDZ4 430 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 SHDQ96IW2 340 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 SNX27Q96L92 541 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 KCNH3Q9ULD8 1083 aa28.93■■■□□ 2.22
NPHP3-202ENST00000383282 I3L4J1 428 aa28.92■■■□□ 2.22
NPHP3-202ENST00000383282 SLC16A4O15374 487 aa28.92■■■□□ 2.22
NPHP3-202ENST00000383282 SOX4Q06945 474 aaPredicted RBP28.92■■■□□ 2.22
NPHP3-202ENST00000383282 MAPK7Q13164 816 aa28.92■■■□□ 2.22
NPHP3-202ENST00000383282 IL17AQ16552 155 aa28.92■■■□□ 2.22
NPHP3-202ENST00000383282 TAS1R3Q7RTX0 852 aa28.92■■■□□ 2.22
NPHP3-202ENST00000383282 MMTAG2Q9BU76 263 aaKnown RBP28.92■■■□□ 2.22
NPHP3-202ENST00000383282 SIT1Q9Y3P8 196 aa28.92■■■□□ 2.22
NPHP3-202ENST00000383282 GUCY2CP25092 1073 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 ELF1P32519 619 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 SPECC1Q5M775 1068 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 RSPO2Q6UXX9 243 aaPredicted RBP28.91■■■□□ 2.22
NPHP3-202ENST00000383282 KCNK18Q7Z418 384 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 KCTD17Q8N5Z5 321 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 ITFG1Q8TB96 612 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 RPP25Q9BUL9 199 aaKnown RBP28.91■■■□□ 2.22
NPHP3-202ENST00000383282 DNMT3BQ9UBC3 853 aaKnown RBP28.91■■■□□ 2.22
NPHP3-202ENST00000383282 NUB1Q9Y5A7 615 aa28.91■■■□□ 2.22
NPHP3-202ENST00000383282 VWA8A3KMH1 1905 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 SFI1A8K8P3 1242 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 SYN3O14994 580 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 HARSP12081 509 aaKnown RBP28.9■■■□□ 2.22
NPHP3-202ENST00000383282 KCNE1P15382 129 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 PROZP22891 400 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 SMTNP53814 917 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 GPC5P78333 572 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 RABEP1Q15276 862 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 C8orf34Q49A92 452 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 CDK5RAP3Q96JB5 506 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 NTPCRQ9BSD7 190 aaKnown RBP28.9■■■□□ 2.22
NPHP3-202ENST00000383282 HCFC1R1Q9NWW0 138 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 CNTN3Q9P232 1028 aa28.9■■■□□ 2.22
NPHP3-202ENST00000383282 LRG1P02750 347 aa28.89■■■□□ 2.22
NPHP3-202ENST00000383282 DCNP07585 359 aaKnown RBP28.89■■■□□ 2.22
NPHP3-202ENST00000383282 RPL9P32969 192 aaKnown RBP28.89■■■□□ 2.22
NPHP3-202ENST00000383282 ATP2C1P98194 919 aaPredicted RBP28.89■■■□□ 2.22
NPHP3-202ENST00000383282 VARS2Q5ST30 1063 aaKnown RBP28.89■■■□□ 2.22
NPHP3-202ENST00000383282 SLC8B1Q6J4K2 584 aa28.89■■■□□ 2.22
NPHP3-202ENST00000383282 ZNF461Q8TAF7 563 aa28.89■■■□□ 2.22
NPHP3-202ENST00000383282 SPIRE2Q8WWL2 714 aa28.89■■■□□ 2.22
NPHP3-202ENST00000383282 ZMAT2Q96NC0 199 aaKnown RBP28.89■■■□□ 2.22
NPHP3-202ENST00000383282 MRPS23Q9Y3D9 190 aaKnown RBP28.89■■■□□ 2.22
NPHP3-202ENST00000383282 H7C4K7 107 aa28.88■■■□□ 2.21
NPHP3-202ENST00000383282 TOM1L1O75674 476 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms