RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 CCDC68Q9H2F9 335 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 ALG6Q9Y672 507 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 HMGB1P1B2RPK0 211 aaPredicted RBP13□□□□□ -0.33
GABPB1-203ENST00000380877 CCT5P48643 541 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 RGS7P49802 495 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 ARL4CP56559 192 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 ADCY2Q08462 1091 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 C6orf118Q5T5N4 469 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 NOTUMQ6P988 496 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 APPL2Q8NEU8 664 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 PPP4R1Q8TF05 950 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 EXOC4Q96A65 974 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 NT5C1AQ9BXI3 368 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 LACRTQ9GZZ8 138 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 DHX35Q9H5Z1 703 aaKnown RBP13□□□□□ -0.33
GABPB1-203ENST00000380877 PI4K2BG5E9Z4 385 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 IRF6O14896 467 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CD4P01730 458 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CDK17Q00537 523 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 DHX34Q14147 1143 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 TAS1R2Q8TE23 839 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 MCUR1Q96AQ8 359 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 SMARCAL1Q9NZC9 954 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 ARHGAP20Q9P2F6 1191 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 INTUQ9ULD6 942 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 PIK3R2O00459 728 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 MT-ND3P03897 115 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CYP2C8P10632 490 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 GTF2H1P32780 548 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CAV1Q03135 178 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CUL2Q13617 745 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 ZNF677Q86XU0 584 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 HPDLQ96IR7 371 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CAMKK2Q96RR4 588 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 POP1Q99575 1024 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 TMEM117Q9H0C3 514 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 EFCC1Q9HA90 598 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 DUSP10Q9Y6W6 482 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 GTPBP10A4D1E9 387 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 NPTXRO95502 500 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 PDGFRBP09619 1106 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 COMTP21964 271 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 ZKSCAN8Q15776 578 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 SCYL1Q96KG9 808 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 SENP7Q9BQF6 1050 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CHORDC1Q9UHD1 332 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 IPO11Q9UI26 975 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 H3BRB1 525 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 STRNO43815 780 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CREB3O43889 395 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 GSDMBQ8TAX9 411 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 CNOT10Q9H9A5 744 aaKnown RBP12.99□□□□□ -0.33
GABPB1-203ENST00000380877 GTF3C4Q9UKN8 822 aa12.99□□□□□ -0.33
GABPB1-203ENST00000380877 KLRC4O43908 158 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 ITGB3P05106 788 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 LCP1P13796 627 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 SV2AQ7L0J3 742 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 MCEEQ96PE7 176 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 MTMR12Q9C0I1 747 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 KLHL11Q9NVR0 708 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 KLHL8Q9P2G9 620 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-203ENST00000380877 GPS1Q13098 491 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 KIZQ2M2Z5 673 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 STMN2Q93045 179 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 SLC35C1Q96A29 364 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 FAM49BQ9NUQ9 324 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 PPP1R11O60927 126 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-203ENST00000380877 GGCXP38435 758 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 FCGRTP55899 365 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 GLIS3Q8NEA6 775 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
GABPB1-203ENST00000380877 RBM12Q9NTZ6 932 aaKnown RBP12.98□□□□□ -0.33
GABPB1-203ENST00000380877 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 PFDN6O15212 129 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 CIB2O75838 187 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 KRT14P02533 472 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 NME3Q13232 169 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 SH3BP5LQ7L8J4 393 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 NOA1Q8NC60 698 aaKnown RBP12.97□□□□□ -0.33
GABPB1-203ENST00000380877 THAP2Q9H0W7 228 aa12.97□□□□□ -0.33
GABPB1-203ENST00000380877 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms