RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 WDR49Q8IV35 697 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 LRRC71Q8N4P6 559 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 CAPNS2Q96L46 248 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 PI4K2AQ9BTU6 479 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 SUGCTQ9HAC7 445 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 DMGDHQ9UI17 866 aaKnown RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 TRPC6Q9Y210 931 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 ACKR2O00590 384 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 DDX3YO15523 660 aaKnown RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 AOC2O75106 756 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 LGALS2P05162 132 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 CYP1A2P05177 515 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 HOXD8P13378 290 aaPredicted RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 ACO1P21399 889 aaKnown RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 BPIFB4P59827 614 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 PTENP60484 403 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 CASP8Q14790 479 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 C8orf74Q6P047 294 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 IFNLR1Q8IU57 520 aaPredicted RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 PARK7Q99497 189 aaKnown RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.67■□□□□ 0.93e-12■□□□□ 9.6
GMDS-201ENST00000380805 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 CPSF3Q9UKF6 684 aaKnown RBP20.67■□□□□ 0.9
GMDS-201ENST00000380805 GTF3C4Q9UKN8 822 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 PGRMC1O00264 195 aaKnown RBP20.66■□□□□ 0.9
GMDS-201ENST00000380805 SURF1Q15526 300 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 FAM110CQ1W6H9 321 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 LMBRD2Q68DH5 695 aaPredicted RBP20.66■□□□□ 0.9
GMDS-201ENST00000380805 AENQ8WTP8 325 aaKnown RBP20.66■□□□□ 0.9
GMDS-201ENST00000380805 HDAC7Q8WUI4 952 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 CARD9Q9H257 536 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 ACP6Q9NPH0 428 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.66■□□□□ 0.91e-7■■■■■ 115.4
GMDS-201ENST00000380805 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 IVNS1ABPQ9Y6Y0 642 aa20.66■□□□□ 0.9
GMDS-201ENST00000380805 SNAI1O95863 264 aaPredicted RBP20.65■□□□□ 0.9
GMDS-201ENST00000380805 TBXAS1P24557 533 aaPredicted RBP20.65■□□□□ 0.9
GMDS-201ENST00000380805 MATR3P43243 847 aaKnown RBP eCLIP20.65■□□□□ 0.99e-7■■■□□ 17.9
GMDS-201ENST00000380805 VEGFBP49765 207 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 TNNC1P63316 161 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 GABPB1Q06547 395 aaPredicted RBP20.65■□□□□ 0.9
GMDS-201ENST00000380805 BIRC3Q13489 604 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 CUL2Q13617 745 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 FAM187BQ17R55 369 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 TAF3Q5VWG9 929 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 MPZL3Q6UWV2 235 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 GPR142Q7Z601 462 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 OR5B17Q8NGF7 314 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 FAM84AQ96KN4 292 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 APOBEC3GQ9HC16 384 aaKnown RBP20.65■□□□□ 0.9
GMDS-201ENST00000380805 MGAMO43451 1857 aa20.65■□□□□ 0.9
GMDS-201ENST00000380805 MAGEB2O15479 319 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 CLTAP09496 248 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 SRGAP2CP0DJJ0 459 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 MYBL2P10244 700 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 UNGP13051 313 aaPredicted RBP20.64■□□□□ 0.9
GMDS-201ENST00000380805 DNA2P51530 1060 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 MBTD1Q05BQ5 628 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 CLEC16AQ2KHT3 1053 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 ACAD10Q6JQN1 1059 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 EFCAB12Q6NXP0 572 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 RHPN2Q8IUC4 686 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 TRAPPC12Q8WVT3 735 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 RPS6KC1Q96S38 1066 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 GDF3Q9NR23 364 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 UVRAGQ9P2Y5 699 aa20.64■□□□□ 0.9
GMDS-201ENST00000380805 MIF4GDA9UHW6 222 aaKnown RBP20.64■□□□□ 0.89
GMDS-201ENST00000380805 CCDC188H7C350 402 aa20.64■□□□□ 0.89
GMDS-201ENST00000380805 CEP104O60308 925 aa20.64■□□□□ 0.89
GMDS-201ENST00000380805 IRF5Q13568 498 aa20.64■□□□□ 0.89
GMDS-201ENST00000380805 SMC1AQ14683 1233 aaKnown RBP20.64■□□□□ 0.89
GMDS-201ENST00000380805 UBR7Q8N806 425 aa20.64■□□□□ 0.89
GMDS-201ENST00000380805 PTPN18Q99952 460 aa20.64■□□□□ 0.89
GMDS-201ENST00000380805 CTTNBP2NLQ9P2B4 639 aa20.64■□□□□ 0.89
GMDS-201ENST00000380805 NOC2LQ9Y3T9 749 aaKnown RBP20.64■□□□□ 0.89
GMDS-201ENST00000380805 BHMG1C9JSJ3 638 aaPredicted RBP20.63■□□□□ 0.89
GMDS-201ENST00000380805 PPFIA4O75335 1185 aa20.63■□□□□ 0.89
GMDS-201ENST00000380805 ASS1P00966 412 aaKnown RBP20.63■□□□□ 0.89
GMDS-201ENST00000380805 KRT5P13647 590 aa20.63■□□□□ 0.89
GMDS-201ENST00000380805 TNFSF9P41273 254 aa20.63■□□□□ 0.89
GMDS-201ENST00000380805 NOP14P78316 857 aaKnown RBP20.63■□□□□ 0.89
GMDS-201ENST00000380805 POU5F1Q01860 360 aaKnown RBP20.63■□□□□ 0.89
GMDS-201ENST00000380805 MAML3Q96JK9 1138 aa20.63■□□□□ 0.89
GMDS-201ENST00000380805 C16orf70Q9BSU1 422 aa20.63■□□□□ 0.89
GMDS-201ENST00000380805 TNFSF13BQ9Y275 285 aa20.63■□□□□ 0.89
GMDS-201ENST00000380805 CYP1A1P04798 512 aaPredicted RBP20.62■□□□□ 0.89
GMDS-201ENST00000380805 INSRRP14616 1297 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 MAPK4P31152 587 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 CLCN3P51790 818 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 NCOA4Q13772 614 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 CLUL1Q15846 466 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 ATF7IP2Q5U623 682 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 EIF1ADQ8N9N8 165 aaKnown RBP20.62■□□□□ 0.89
GMDS-201ENST00000380805 IFT122Q9HBG6 1241 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 AVENQ9NQS1 362 aaPredicted RBP20.62■□□□□ 0.89
GMDS-201ENST00000380805 PRMT7Q9NVM4 692 aaPredicted RBP20.62■□□□□ 0.89
GMDS-201ENST00000380805 ALG6Q9Y672 507 aa20.62■□□□□ 0.89
GMDS-201ENST00000380805 B4GALT4O60513 344 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ZMYND10O75800 440 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms