RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 URGCPQ8TCY9 931 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 FAM84AQ96KN4 292 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 YME1L1Q96TA2 773 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 RAD9AQ99638 391 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 HCSTQ9UBK5 93 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 INSL6Q9Y581 213 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 PTPRJQ12913 1337 aa20.38■□□□□ 0.85
SMN2-202ENST00000380742 TLL1O43897 1013 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 B4GALT3O60512 393 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 GNA14O95837 355 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 THP07101 528 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 DLATP10515 647 aaKnown RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 VAMP7P51809 220 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 MARSP56192 900 aaKnown RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 GRIK3Q13003 919 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 SURF1Q15526 300 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 CDKAL1Q5VV42 579 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 LMBRD2Q68DH5 695 aaPredicted RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 LUZP1Q86V48 1076 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 ZNF280BQ86YH2 543 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 CMTR2Q8IYT2 770 aaKnown RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 FAM200AQ8TCP9 573 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 TMC2Q8TDI7 906 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 C18orf25Q96B23 403 aaPredicted RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 KIF12Q96FN5 646 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 CNOT6LQ96LI5 555 aaKnown RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 KANSL3Q9P2N6 904 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 ARMCX3Q9UH62 379 aaPredicted RBP20.37■□□□□ 0.85
SMN2-202ENST00000380742 DERAQ9Y315 318 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 C2CD2Q9Y426 696 aa20.37■□□□□ 0.85
SMN2-202ENST00000380742 LRRIQ3A6PVS8 624 aaPredicted RBP20.36■□□□□ 0.85
SMN2-202ENST00000380742 SMTNL1A8MU46 457 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 DDHD2O94830 711 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 TRIM49P0CI25 452 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 TRIM49CP0CI26 452 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 KRT13P13646 458 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 CLDN10P78369 228 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 SOX4Q06945 474 aaPredicted RBP20.36■□□□□ 0.85
SMN2-202ENST00000380742 BTG3Q14201 252 aaPredicted RBP20.36■□□□□ 0.85
SMN2-202ENST00000380742 TMEM132DQ14C87 1099 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 RSPH1Q8WYR4 309 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 ZNF516Q92618 1163 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 FNBP1Q96RU3 617 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 CGRRF1Q99675 332 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 MRPL9Q9BYD2 267 aaKnown RBP20.36■□□□□ 0.85
SMN2-202ENST00000380742 METTL14Q9HCE5 456 aaKnown RBP20.36■□□□□ 0.85
SMN2-202ENST00000380742 TUBGCP4Q9UGJ1 667 aa20.36■□□□□ 0.85
SMN2-202ENST00000380742 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.35■□□□□ 0.85
SMN2-202ENST00000380742 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.35■□□□□ 0.85
SMN2-202ENST00000380742 LCHNA4D1U4 455 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 BECN2A8MW95 431 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 MYOGP15173 224 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 TNNI1P19237 187 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 ENPEPQ07075 957 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 CREBRFQ8IUR6 639 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 WDR49Q8IV35 697 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 TRIM59Q8IWR1 403 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 LRRC43Q8N309 656 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 OR5B17Q8NGF7 314 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 SP7Q8TDD2 431 aaPredicted RBP20.35■□□□□ 0.85
SMN2-202ENST00000380742 ANP32EQ9BTT0 268 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 CWH43Q9H720 699 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 NRDE2Q9H7Z3 1164 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 INTS13Q9NVM9 706 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 COLQQ9Y215 455 aaPredicted RBP20.35■□□□□ 0.85
SMN2-202ENST00000380742 SCN1AP35498 2009 aa20.35■□□□□ 0.85
SMN2-202ENST00000380742 KCNJ18B7U540 433 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 ZNF18P17022 549 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 GUCY2FP51841 1108 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 TFAMQ00059 246 aaKnown RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 RNASELQ05823 741 aaKnown RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 DSC1Q08554 894 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 KCNJ12Q14500 433 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 GAS2L3Q86XJ1 694 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 NT5DC4Q86YG4 428 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 FAM114A1Q8IWE2 563 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 SLC35C1Q96A29 364 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 GOLGA2P5Q9HBQ8 144 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 CACNG4Q9UBN1 327 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 DNAJB4Q9UDY4 337 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 UBQLN1Q9UMX0 589 aaKnown RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 MRPL42Q9Y6G3 142 aaKnown RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 PBX2P40425 430 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 PPP3CAQ08209 521 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 TUSC3Q13454 348 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 TCP11X2Q5H9J9 407 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 DCAF17Q5H9S7 520 aaPredicted RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 PRPF38BQ5VTL8 546 aaKnown RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 TCERG1LQ5VWI1 586 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 SCARA3Q6AZY7 606 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 COLGALT2Q8IYK4 626 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 RNF214Q8ND24 703 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 FAM193BQ96PV7 902 aaPredicted RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 MTMR12Q9C0I1 747 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 SLC38A7Q9NVC3 462 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 MAGEC2Q9UBF1 373 aaPredicted RBP20.34■□□□□ 0.85
SMN2-202ENST00000380742 PCDHA11Q9Y5I1 949 aa20.34■□□□□ 0.85
SMN2-202ENST00000380742 CYP3A5P20815 502 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 MTIF2P46199 727 aaKnown RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms