RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 RAB33AQ14088 237 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 ZNF568Q3ZCX4 644 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 RINT1Q6NUQ1 792 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 DCLRE1AQ6PJP8 1040 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 DTHD1Q6ZMT9 781 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 KCNK18Q7Z418 384 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 CCDC105Q8IYK2 499 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 SLC7A14Q8TBB6 771 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 UROC1Q96N76 676 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 MRPL4Q9BYD3 311 aaKnown RBP18.51■□□□□ 0.55
SMN2-201ENST00000380741 TMEM134Q9H6X4 195 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.51■□□□□ 0.55
SMN2-201ENST00000380741 MTRRQ9UBK8 725 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 NUMBLQ9Y6R0 609 aa18.51■□□□□ 0.55
SMN2-201ENST00000380741 PDCD11Q14690 1871 aaKnown RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 I3L4J1 428 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 TKTP29401 623 aaKnown RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 YARSP54577 528 aaKnown RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 SOX4Q06945 474 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 XKR4Q5GH76 650 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 AXDND1Q5T1B0 1012 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 RSPO2Q6UXX9 243 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 C1orf186Q6ZWK4 172 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 GPR152Q8TDT2 470 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 DRC1Q96MC2 740 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 TARS2Q9BW92 718 aaKnown RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 KMT5AQ9NQR1 393 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 TOPORSQ9NS56 1045 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 POLIQ9UNA4 740 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 CDY1Q9Y6F8 540 aa18.5■□□□□ 0.55
SMN2-201ENST00000380741 ZFP37Q9Y6Q3 630 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 PTPRZ1P23471 2315 aaPredicted RBP18.5■□□□□ 0.55
SMN2-201ENST00000380741 STK25O00506 426 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 BRCC3P46736 316 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 ZRSR1Q15695 479 aaKnown RBP18.49■□□□□ 0.55
SMN2-201ENST00000380741 ALKAL1Q6UXT8 129 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 ASCL5Q7RTU5 278 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 FRMD5Q7Z6J6 570 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 DTWD2Q8NBA8 298 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 FGF14Q92915 247 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 DDX27Q96GQ7 796 aaKnown RBP18.49■□□□□ 0.55
SMN2-201ENST00000380741 ZMAT2Q96NC0 199 aaKnown RBP18.49■□□□□ 0.55
SMN2-201ENST00000380741 RPP25Q9BUL9 199 aaKnown RBP18.49■□□□□ 0.55
SMN2-201ENST00000380741 CDH7Q9ULB5 785 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 FAM186AA6NE01 2351 aa18.49■□□□□ 0.55
SMN2-201ENST00000380741 PRR23AA6NEV1 266 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 SFI1A8K8P3 1242 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 ABLIM1O14639 778 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 SLC16A4O15374 487 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 TRAPPC3O43617 180 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 XYLBO75191 536 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 POU2F2P09086 479 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 RFX1P22670 979 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 PROZP22891 400 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 ATP2C1P98194 919 aaPredicted RBP18.48■□□□□ 0.55
SMN2-201ENST00000380741 RAD51AP2Q09MP3 1159 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 RABEP1Q15276 862 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 ANGPT1Q15389 498 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 UVSSAQ2YD98 709 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 PARM1Q6UWI2 310 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 FGF13Q92913 245 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 SNX27Q96L92 541 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 TBC1D17Q9HA65 648 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 ARHGEF3Q9NR81 526 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 SLC2A4RGQ9NR83 387 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 SLC38A7Q9NVC3 462 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 HCFC1R1Q9NWW0 138 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 KIF3AQ9Y496 699 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 RBM19Q9Y4C8 960 aaKnown RBP18.48■□□□□ 0.55
SMN2-201ENST00000380741 BACE2Q9Y5Z0 518 aa18.48■□□□□ 0.55
SMN2-201ENST00000380741 WDR87Q6ZQQ6 2873 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 MCF2P10911 925 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 GUCY2CP25092 1073 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 RILPL1Q5EBL4 403 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 MPZL3Q6UWV2 235 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 ANKS3Q6ZW76 656 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 ITFG1Q8TB96 612 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 ACAP3Q96P50 834 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 PNMA5Q96PV4 448 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
SMN2-201ENST00000380741 PODXLO00592 558 aa18.46■□□□□ 0.55
SMN2-201ENST00000380741 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
SMN2-201ENST00000380741 HARSP12081 509 aaKnown RBP18.46■□□□□ 0.55
SMN2-201ENST00000380741 KCNE1P15382 129 aa18.46■□□□□ 0.55
SMN2-201ENST00000380741 HYIQ5T013 277 aa18.46■□□□□ 0.55
SMN2-201ENST00000380741 ZBTB45Q96K62 511 aaPredicted RBP18.46■□□□□ 0.55
SMN2-201ENST00000380741 PLIN2Q99541 437 aa18.46■□□□□ 0.55
SMN2-201ENST00000380741 NTPCRQ9BSD7 190 aaKnown RBP18.46■□□□□ 0.55
SMN2-201ENST00000380741 CNTN3Q9P232 1028 aa18.46■□□□□ 0.55
SMN2-201ENST00000380741 DNMT3BQ9UBC3 853 aaKnown RBP18.46■□□□□ 0.55
SMN2-201ENST00000380741 SPTBN4Q9H254 2564 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 VWA3AA6NCI4 1184 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 PLS3P13797 630 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 ROR1Q01973 937 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 PABPC1LQ4VXU2 614 aaKnown RBP18.45■□□□□ 0.54
SMN2-201ENST00000380741 VARS2Q5ST30 1063 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms