RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 NOL7Q9UMY1 257 aaKnown RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 KIAA1024Q9UPX6 916 aa25.39■■□□□ 1.66
U2AF1-202ENST00000380276 MRPS23Q9Y3D9 190 aaKnown RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 KANSL1LA0AUZ9 987 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 TMEM189-UBE2V1I3L0A0 370 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 GLULP15104 373 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 RBM25P49756 843 aaKnown RBP25.38■■□□□ 1.65
U2AF1-202ENST00000380276 ARPP19P56211 112 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 ECM1Q16610 540 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 UVSSAQ2YD98 709 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 ZNF568Q3ZCX4 644 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 RSPO2Q6UXX9 243 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-202ENST00000380276 ANKS3Q6ZW76 656 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 NPAS3Q8IXF0 933 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 KIAA2013Q8IYS2 634 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 FAM184AQ8NB25 1140 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 DDX27Q96GQ7 796 aaKnown RBP25.38■■□□□ 1.65
U2AF1-202ENST00000380276 BCO2Q9BYV7 579 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 FOXP1Q9H334 677 aaPredicted RBP25.38■■□□□ 1.65
U2AF1-202ENST00000380276 DDX19AQ9NUU7 478 aaKnown RBP25.38■■□□□ 1.65
U2AF1-202ENST00000380276 COL4A3Q01955 1670 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 FAM186AA6NE01 2351 aa25.38■■□□□ 1.65
U2AF1-202ENST00000380276 MIA3Q5JRA6 1907 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 MUTP22033 750 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 ELF1P32519 619 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 PEX3P56589 373 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 PFKPQ01813 784 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 NBR1Q14596 966 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 SLC44A4Q53GD3 710 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 ERMP1Q7Z2K6 904 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 CEP120Q8N960 986 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 SNX29Q8TEQ0 813 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 MCRS1Q96EZ8 462 aa25.37■■□□□ 1.65
U2AF1-202ENST00000380276 TOPORSQ9NS56 1045 aaPredicted RBP25.37■■□□□ 1.65
U2AF1-202ENST00000380276 LAMTOR5O43504 91 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 LRG1P02750 347 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 HARSP12081 509 aaKnown RBP25.36■■□□□ 1.65
U2AF1-202ENST00000380276 PRKCQQ04759 706 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 UPP1Q16831 310 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 C3orf58Q8NDZ4 430 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 CDT1Q9H211 546 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 KCNH3Q9ULD8 1083 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 LIMCH1Q9UPQ0 1083 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 TNFSF13BQ9Y275 285 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 BACE2Q9Y5Z0 518 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 VPS13AQ96RL7 3174 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 PHLPP2Q6ZVD8 1323 aa25.36■■□□□ 1.65
U2AF1-202ENST00000380276 SMIM28A0A1B0GU29 152 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 FAM170BA6NMN3 283 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 PRRG1O14668 218 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 RHOP08100 348 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 CD72P21854 359 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 GRM5P41594 1212 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 TCHPQ9BT92 498 aa25.35■■□□□ 1.65
U2AF1-202ENST00000380276 RIF1Q5UIP0 2472 aaKnown RBP25.35■■□□□ 1.65
U2AF1-202ENST00000380276 PODXLO00592 558 aa25.34■■□□□ 1.65
U2AF1-202ENST00000380276 EIF5BO60841 1220 aaKnown RBP25.34■■□□□ 1.65
U2AF1-202ENST00000380276 KINO60870 393 aaKnown RBP25.34■■□□□ 1.65
U2AF1-202ENST00000380276 POU2F2P09086 479 aa25.34■■□□□ 1.65
U2AF1-202ENST00000380276 FXR2P51116 673 aaKnown RBP eCLIP25.34■■□□□ 1.65
U2AF1-202ENST00000380276 TPRG1Q6ZUI0 275 aa25.34■■□□□ 1.65
U2AF1-202ENST00000380276 MRPL4Q9BYD3 311 aaKnown RBP25.34■■□□□ 1.65
U2AF1-202ENST00000380276 RAB34Q9BZG1 259 aa25.34■■□□□ 1.65
U2AF1-202ENST00000380276 MTF2Q9Y483 593 aaPredicted RBP25.34■■□□□ 1.65
U2AF1-202ENST00000380276 NUB1Q9Y5A7 615 aa25.34■■□□□ 1.65
U2AF1-202ENST00000380276 ROR1Q01973 937 aa25.33■■□□□ 1.65
U2AF1-202ENST00000380276 SOX4Q06945 474 aaPredicted RBP25.33■■□□□ 1.65
U2AF1-202ENST00000380276 DMP1Q13316 513 aaPredicted RBP25.33■■□□□ 1.65
U2AF1-202ENST00000380276 VARS2Q5ST30 1063 aaKnown RBP25.33■■□□□ 1.65
U2AF1-202ENST00000380276 CD300LGQ6UXG3 332 aa25.33■■□□□ 1.65
U2AF1-202ENST00000380276 ACO2Q99798 780 aaKnown RBP25.33■■□□□ 1.65
U2AF1-202ENST00000380276 TARS2Q9BW92 718 aaKnown RBP25.33■■□□□ 1.65
U2AF1-202ENST00000380276 LTB4R2Q9NPC1 389 aa25.33■■□□□ 1.65
U2AF1-202ENST00000380276 KMT5AQ9NQR1 393 aa25.33■■□□□ 1.65
U2AF1-202ENST00000380276 SLC38A7Q9NVC3 462 aa25.33■■□□□ 1.65
U2AF1-202ENST00000380276 TRIP11Q15643 1979 aa25.33■■□□□ 1.64
U2AF1-202ENST00000380276 E9PMD0 336 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 HIP1RO75146 1068 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 CEBPBP17676 345 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 NPTX2P47972 431 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 SLC5A9Q2M3M2 681 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 RTL10Q7L3V2 364 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 FBXO18Q8NFZ0 1043 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 RUBCNQ92622 972 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 CORO1BQ9BR76 489 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 LLPHQ9BRT6 129 aaKnown RBP25.32■■□□□ 1.64
U2AF1-202ENST00000380276 CYP4F11Q9HBI6 524 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 DAXXQ9UER7 740 aaPredicted RBP25.32■■□□□ 1.64
U2AF1-202ENST00000380276 DNM3Q9UQ16 869 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 STK24Q9Y6E0 443 aa25.32■■□□□ 1.64
U2AF1-202ENST00000380276 PTPN2P17706 415 aa25.31■■□□□ 1.64
U2AF1-202ENST00000380276 TRAPPC10P48553 1259 aa25.31■■□□□ 1.64
U2AF1-202ENST00000380276 HMGN5P82970 282 aaKnown RBP25.31■■□□□ 1.64
U2AF1-202ENST00000380276 CSTF1Q05048 431 aaKnown RBP25.31■■□□□ 1.64
U2AF1-202ENST00000380276 ZRSR1Q15695 479 aaKnown RBP25.31■■□□□ 1.64
U2AF1-202ENST00000380276 KRT79Q5XKE5 535 aa25.31■■□□□ 1.64
U2AF1-202ENST00000380276 DCLK2Q8N568 766 aa25.31■■□□□ 1.64
U2AF1-202ENST00000380276 ZNF461Q8TAF7 563 aa25.31■■□□□ 1.64
U2AF1-202ENST00000380276 RMDN1Q96DB5 314 aa25.31■■□□□ 1.64
U2AF1-202ENST00000380276 ACAP3Q96P50 834 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms